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bjp_ig2103_scaffold_5_curated_128

Organism: BJP_Ig2103_Hor_218_2014_ACD39_50_23_curated

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 13 / 38
Location: comp(209865..210704)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=4496886 bin=GWC2_ACD39_50_8 species=Turneriella parva genus=Turneriella taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_ACD39_50_8 organism_group=ACD39 similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 280.0
  • Bit_score: 535
  • Evalue 2.30e-149
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 263.0
  • Bit_score: 285
  • Evalue 1.70e-74
similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 280.0
  • Bit_score: 535
  • Evalue 4.80e-149

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Notes

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Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 840
GTGAACAAAGAACTTCTGGTAGGAAACGAACCGCAGGCAATTACTGACCCCAAGCTGAAAGCACGTCTTCAGGACGAAGAGGATCAAAACCTCTGGGAGCAGTATAAAACCAACCATGATCAGCGTATCAAAGATGCTCTGATCATGAAATACGCGTCATTCGTCAAATACGTCGCCGGCCGCATCGCGGTAAACCTTCCCAGTAATGTCGAATTCGACGACCTGGTAAGCTATGGCATACTTGGTCTGATCGATGCCATCGACAAATACGATTCTGACCGCAATGTCAAATTCAAAACCTACGCCAAGACGCGCATACGCGGCGCTATTTTTGACGAACTGCGTGTTCTTGACTGGACACCGCGATCGATTCGCCAGAAAGCCCGTAAGCTCGAAAAGGCCTATGCAAAGCTTGAAGGAAAACTTGGTCGCGACGCCCGTGACGAAGAAATTGCCGAGTACCTTAACATCGACATTTCTGAACTGCACAAGCTGTTCGACGAAACCAAAAAATCATTGCTGCTGTCGCTCGACGAAATCTTTTATGACGACGAAGAAGGCTCTTCGCGCTTTGACTTTATTGAAGACCAGAAAAGCGACAACCCGCAGAGCAAAATCGAAGAAGCCGAAGCTAAAAAGATTCTTGCCGACGCTATCTCGAAGCTCTCAGACCGTGAACGCATGGTAATCACCCTGTATTACTACGAAGAACTGACCTCAAAAGAAATCGGCAAGATTCTTGGAGTCTCGGATTCACGTGTATCACAGCTGCATACCAAGGCGATACTGCGTCTGCGCGGCCGCCTGAGCCGCATCAAGGAAGCGTTGATGCAGAGCTGA
PROTEIN sequence
Length: 280
VNKELLVGNEPQAITDPKLKARLQDEEDQNLWEQYKTNHDQRIKDALIMKYASFVKYVAGRIAVNLPSNVEFDDLVSYGILGLIDAIDKYDSDRNVKFKTYAKTRIRGAIFDELRVLDWTPRSIRQKARKLEKAYAKLEGKLGRDARDEEIAEYLNIDISELHKLFDETKKSLLLSLDEIFYDDEEGSSRFDFIEDQKSDNPQSKIEEAEAKKILADAISKLSDRERMVITLYYYEELTSKEIGKILGVSDSRVSQLHTKAILRLRGRLSRIKEALMQS*