ggKbase home page

Ig5185_scaffold_969

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5185_scaffold_969_1
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(1..606)
-----------------
DNA (606bp)
protein (202aa)
Fe-S cluster domain protein n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EE27_AMICL
Fe-S cluster domain-containing protein
Fe-S cluster domain protein {ECO:0000313|EMBL:ADE56809.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
Ig5185_scaffold_969_2
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(675..1109)
-----------------
DNA (435bp)
protein (145aa)
Putative anti-sigma regulatory factor, serine/threonine protein kinase n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EE26_AMICL
putative anti-sigma regulatory factor
Putative anti-sigma regulatory factor, serine/threonine protein kinase {ECO:0000313|EMBL:ADE56808.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
Ig5185_scaffold_969_3
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(1113..1478)
-----------------
DNA (366bp)
protein (122aa)
DRTGG domain protein n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EE25_AMICL
DRTGG domain-containing protein
DRTGG domain protein {ECO:0000313|EMBL:ADE56807.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
Ig5185_scaffold_969_4
Dethiosulfovibrio peptidovorans, Dethiosulfovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(1530..2819)
-----------------
DNA (1290bp)
protein (430aa)
Uncharacterized protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z2L1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFC92024.1}; Flags: Precursor;; TaxID=469381 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Dethiosulfovibrio.;" source="Dethiosulfovibrio peptidovorans DSM 11002.;"
hypothetical protein
Ig5185_scaffold_969_5
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(2819..3316)
-----------------
DNA (498bp)
protein (166aa)
Putative uncharacterized protein n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EE24_AMICL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE56806.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
Ig5185_scaffold_969_6
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(3363..4193)
-----------------
DNA (831bp)
protein (277aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EE23_AMICL
HAD superfamily hydrolase
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:ADE56805.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
Ig5185_scaffold_969_7
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(4318..4764)
-----------------
DNA (447bp)
protein (149aa)
Outer membrane chaperone Skp (OmpH) n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EE22_AMICL
outer membrane chaperone Skp
Outer membrane chaperone Skp (OmpH) {ECO:0000313|EMBL:ADE56804.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
Ig5185_scaffold_969_8
Dethiosulfovibrio peptidovorans, Dethiosulfovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(4864..6006)
-----------------
DNA (1143bp)
protein (381aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FTQ4_METHJ rbh
DegT/DnrJ/EryC1/StrS aminotransferase rbh
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:EFC92019.1}; TaxID=469381 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Dethiosulfovibrio.;" source="Dethiosulfovibrio peptidovorans DSM 11002.;"
Ig5185_scaffold_969_9
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(6012..6515)
-----------------
DNA (504bp)
protein (168aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
CMP/dCMP deaminase zinc-binding protein n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EFL9_AMICL
zinc-binding CMP/dCMP deaminase protein
Ig5185_scaffold_969_10
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(6521..8092)
-----------------
DNA (1572bp)
protein (524aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EFM0_AMICL rbh
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase rbh
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:ADE57352.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
Ig5185_scaffold_969_11
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(8076..9023)
-----------------
DNA (948bp)
protein (316aa)
arsenite-activated ATPase ArsA (EC:3.6.3.16) rbh
Arsenite-activated ATPase ArsA {ECO:0000313|EMBL:ADE57355.1}; EC=3.6.3.16 {ECO:0000313|EMBL:ADE57355.1};; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
Arsenite-activated ATPase ArsA n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EFM3_AMICL rbh
Ig5185_scaffold_969_12
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(9037..9345)
-----------------
DNA (309bp)
protein (103aa)
Putative uncharacterized protein n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EFM4_AMICL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE57356.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
Ig5185_scaffold_969_13
Burkholderiaceae bacterium 26, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9349..9543)
-----------------
DNA (195bp)
protein (65aa)
4-oxalocrotonate tautomerase n=5 Tax=Ralstonia RepID=B2U862_RALPJ
4-oxalocrotonate tautomerase
4-oxalocrotonate tautomerase {ECO:0000313|EMBL:KJJ99386.1}; TaxID=1619951 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 26.;"
Ig5185_scaffold_969_14
Fretibacterium fastidiosum, Fretibacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(9621..10106)
-----------------
DNA (486bp)
protein (162aa)
Putative uncharacterized protein n=1 Tax=Fretibacterium fastidiosum RepID=D4M8K1_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL28196.1}; TaxID=651822 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Fretibacterium.;" source="Fretibacterium fastidiosum.;"
Ig5185_scaffold_969_15
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(10214..12028)
-----------------
DNA (1815bp)
protein (605aa)
hypothetical protein id=14631781 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
Predicted periplasmic protein (DUF2233).
Tax=CSP1_3_Armatimonadetes
Ig5185_scaffold_969_trna_2
unknown

Not on your lists

comp(12203..12276)
-----------------
DNA (74bp)
transferRNA Arg
Ig5185_scaffold_969_trna_1
unknown

Not on your lists

comp(12383..12474)
-----------------
DNA (92bp)
transferRNA Ser
Ig5185_scaffold_969_16
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(12542..13615)
-----------------
DNA (1074bp)
protein (358aa)
Putative uncharacterized protein n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EFP7_AMICL rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADE57379.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
Ig5185_scaffold_969_17
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(13691..14623)
-----------------
DNA (933bp)
protein (311aa)
DNA polymerase I (EC:2.7.7.7)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
DNA polymerase n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EFP8_AMICL
Displaying 19 items

View Taxonomy