ggKbase home page

BSR_Lac_LFCR_na_at_48260

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_LFCR_na_at_48260_1
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..1192
DNA (1191bp) protein (397aa)
Uncharacterized protein n=2 Tax=Blautia RepID=R5C2Q5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX59127.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
hypothetical protein
BSR_Lac_LFCR_na_at_48260_2
Anaerobaculum hydrogeniformans, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

1379..2761
DNA (1383bp) protein (461aa)
Putative 4-aminobutyrate transaminase n=1 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L081_9BACT
Putative 4-aminobutyrate transaminase {ECO:0000313|EMBL:EFD25303.1}; TaxID=592015 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum hydrogeniformans ATCC BAA-1850.;"
pyridoxal phosphate-dependent aminotransferase
BSR_Lac_LFCR_na_at_48260_3
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

3175..4188
DNA (1014bp) protein (338aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
ABC transporter related protein n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EGV1_AMICL
ABC transporter-like protein
BSR_Lac_LFCR_na_at_48260_4
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

4181..4843
DNA (663bp) protein (221aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EGV2_AMICL
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADE57784.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_48260_5
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

4903..5703
DNA (801bp) protein (267aa)
Lipoprotein n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EGV3_AMICL
NLPA lipoprotein
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_48260_6
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(5771..6922)
DNA (1152bp) protein (384aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EGV4_AMICL
mandelate racemase/muconate lactonizing protein
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ADE57786.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_48260_7
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(6938..7966)
DNA (1029bp) protein (343aa)
PfkB domain protein n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EGV5_AMICL
PfkB domain-containing protein
PfkB domain protein {ECO:0000313|EMBL:ADE57787.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_48260_8
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(7985..8647)
DNA (663bp) protein (221aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EGV6_AMICL
2-dehydro-3-deoxyphosphogluconate aldolase
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:ADE57788.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_48260_9
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(8647..9435)
DNA (789bp) protein (263aa)
Transcriptional regulator, IclR family n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EGV7_AMICL
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ADE57789.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_48260_10
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(9460..10734)
DNA (1275bp) protein (425aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EGV8_AMICL
TRAP dicarboxylate transporter subunit DctM
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:ADE57790.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_48260_11
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(10736..11221)
DNA (486bp) protein (162aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EGV9_AMICL
tripartite AtP-independent periplasmic transporter subunit DctQ
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:ADE57791.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_48260_12
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(11328..12329)
DNA (1002bp) protein (334aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EGW0_AMICL
TRAP dicarboxylate transporter subunit DctP
TRAP dicarboxylate transporter, DctP subunit {ECO:0000313|EMBL:ADE57792.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_48260_13
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(12416..13894)
DNA (1479bp) protein (493aa)
altronate dehydratase (EC:4.2.1.7)
Altronate dehydratase {ECO:0000313|EMBL:ADE57793.1}; EC=4.2.1.7 {ECO:0000313|EMBL:ADE57793.1};; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
Altronate dehydratase n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EGW1_AMICL
BSR_Lac_LFCR_na_at_48260_14
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

14118..14927
DNA (810bp) protein (270aa)
Phosphate binding protein n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EGW2_AMICL
phosphate binding protein
Phosphate binding protein {ECO:0000313|EMBL:ADE57794.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_48260_15
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

15026..15895
DNA (870bp) protein (290aa)
Phosphate ABC transporter, inner membrane subunit PstC n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EGW3_AMICL
phosphate ABC transporter permease
Phosphate ABC transporter, inner membrane subunit PstC {ECO:0000313|EMBL:ADE57795.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_48260_16
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

15892..16743
DNA (852bp) protein (284aa)
Phosphate ABC transporter, inner membrane subunit PstA n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EGW4_AMICL
phosphate ABC transporter permease
Phosphate ABC transporter, inner membrane subunit PstA {ECO:0000313|EMBL:ADE57796.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_48260_17
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

16768..17526
DNA (759bp) protein (253aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
Phosphate ABC transporter, ATPase subunit n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EGW5_AMICL
phosphate ABC transporter ATPase
BSR_Lac_LFCR_na_at_48260_18
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

17563..18258
DNA (696bp) protein (232aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EGW6_AMICL
phosphate uptake regulator PhoU
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_48260_19
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

18255..18947
DNA (693bp) protein (231aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EGW7_AMICL
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADE57799.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_48260_20
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

18951..20702
DNA (1752bp) protein (584aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
Multi-sensor signal transduction histidine kinase n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EGW8_AMICL
multi-sensor signal transduction histidine kinase
BSR_Lac_LFCR_na_at_48260_21
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(20784..21974)
DNA (1191bp) protein (397aa)
amidohydrolase (EC:3.5.1.14)
Amidohydrolase {ECO:0000313|EMBL:ADE57973.1}; EC=3.5.1.14 {ECO:0000313|EMBL:ADE57973.1};; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
Amidohydrolase n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EHE1_AMICL
BSR_Lac_LFCR_na_at_48260_22
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(22073..23281)
DNA (1209bp) protein (403aa)
amidohydrolase (EC:3.5.1.14)
Amidohydrolase {ECO:0000313|EMBL:ADE57972.1}; EC=3.5.1.14 {ECO:0000313|EMBL:ADE57972.1};; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
Amidohydrolase n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EHE0_AMICL
BSR_Lac_LFCR_na_at_48260_23
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(23422..24108)
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EHD9_AMICL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE57971.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_48260_24
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(24128..24859)
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EHD8_AMICL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE57970.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_48260_25

Not on your lists

comp(25484..26353)
DNA (870bp) protein (290aa)
Putative acetamidase/formamidase n=1 Tax=Mesotoga prima MesG1.Ag.4.2 RepID=I2F1P4_9THEM
Marine sediment metagenome DNA, contig: S03H2_S13630 {ECO:0000313|EMBL:GAH74153.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
acetamidase/formamidase
BSR_Lac_LFCR_na_at_48260_26
Halanaerobium saccharolyticum, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26328..27371)
DNA (1044bp) protein (348aa)
Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5EDK4_9FIRM
Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) {ECO:0000313|EMBL:CCU79124.1}; TaxID=1293054 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643.;"
putative branched-chain amino acid ABC transporter permease
BSR_Lac_LFCR_na_at_48260_27
Halanaerobium saccharolyticum, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27384..28286)
DNA (903bp) protein (301aa)
High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5E072_9FIRM
High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) {ECO:0000313|EMBL:CCU79123.1}; TaxID=1293054 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643.;"
amino acid ABC transporter permease
BSR_Lac_LFCR_na_at_48260_28
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28290..28997)
DNA (708bp) protein (236aa)
polyamine-transporting ATPase (EC:3.6.3.31)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5SBY7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ42567.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
BSR_Lac_LFCR_na_at_48260_29
Thermacetogenium phaeum, Thermacetogenium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28991..29794)
DNA (804bp) protein (268aa)
High-affinity branched-chain amino acid transport ATP-binding protein LivG n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LC56_THEPS
livG1; high-affinity branched-chain amino acid transporter ATP-binding protein LivG
High-affinity branched-chain amino acid transport ATP-binding protein LivG {ECO:0000313|EMBL:AFV10298.1}; TaxID=1089553 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermacetogenium.;" source="Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB).;"
BSR_Lac_LFCR_na_at_48260_30
Halanaerobium saccharolyticum, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29868..31091)
DNA (1224bp) protein (408aa)
Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5DZC6_9FIRM
Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) {ECO:0000313|EMBL:CCU79117.1}; TaxID=1293054 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643.;"
Leu/Ile/Val-binding protein
Displaying items 1-30 of 70 in total

View Taxonomy