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BSR_Lac_LFCR_na_at_38746

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_LFCR_na_at_38746_1
unknown

Not on your lists

comp(3..95)
DNA (93bp) protein (31aa)

This feature has no annotations

BSR_Lac_LFCR_na_at_38746_2
Dethiosulfovibrio peptidovorans, Dethiosulfovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

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452..1753
DNA (1302bp) protein (434aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z5J0_9BACT
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:EFC90737.1}; TaxID=469381 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Dethiosulfovibrio.;" source="Dethiosulfovibrio peptidovorans DSM 11002.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
BSR_Lac_LFCR_na_at_38746_3
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(1742..1954)
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EDI6_AMICL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE56618.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_38746_4
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

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comp(2033..3025)
DNA (993bp) protein (331aa)
ornithine cyclodeaminase (EC:4.3.1.12)
Ornithine cyclodeaminase {ECO:0000313|EMBL:ADE57373.1}; EC=4.3.1.12 {ECO:0000313|EMBL:ADE57373.1};; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
Ornithine cyclodeaminase n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EFP1_AMICL
BSR_Lac_LFCR_na_at_38746_5
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(3041..3817)
DNA (777bp) protein (259aa)
Extracellular solute-binding protein family 3 n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EFP0_AMICL
family 3 extracellular solute-binding protein
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ADE57372.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_38746_6
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

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3951..5030
DNA (1080bp) protein (360aa)
NAD/NADP octopine/nopaline dehydrogenase n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EFN9_AMICL
NAD/NADP octopine/nopaline dehydrogenase
NAD/NADP octopine/nopaline dehydrogenase {ECO:0000313|EMBL:ADE57371.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_38746_7
Pyramidobacter piscolens, Pyramidobacter, Synergistales, Synergistia, Synergistetes, Bacteria

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comp(5098..6384)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y5J7_9BACT
UPF0597 protein HMPREF7215_1935 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=352165 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Pyramidobacter.;" source="Pyramidobacter piscolens W5455.;"
hypothetical protein
BSR_Lac_LFCR_na_at_38746_8
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(6491..7513)
DNA (1023bp) protein (341aa)
TRAP-type C4-dicarboxylate transport system, periplasmic component n=1 Tax=Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA) RepID=I4BY56_ANAMD
TRAP-type C4-dicarboxylate transport system, periplasmic component
TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:AFM22213.1}; Flags: Precursor;; TaxID=891968 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA).;"
BSR_Lac_LFCR_na_at_38746_9

Not on your lists

comp(7567..8874)
DNA (1308bp) protein (436aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8WZ99_DESRD
Marine sediment metagenome DNA, contig: S01H4_C01182 {ECO:0000313|EMBL:GAG63987.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
TRAP dicarboxylate transporter subunit DctM
BSR_Lac_LFCR_na_at_38746_10
Thermovirga lienii, Thermovirga, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(8868..9368)
DNA (501bp) protein (167aa)
DctQ (C4-dicarboxylate permease, small subunit) n=1 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V7A9_THELD
DctQ (C4-dicarboxylate permease, small subunit)
DctQ (C4-dicarboxylate permease, small subunit) {ECO:0000313|EMBL:AER67225.1}; Flags: Precursor;; TaxID=580340 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermovirga.;" source="Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314).;"
BSR_Lac_LFCR_na_at_38746_11
BJP_IG2069_Synergistales_47_25, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(9581..10369)
DNA (789bp) protein (263aa)
Transcriptional regulator, GntR family n=1 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V7A8_THELD
GntR family transcriptional regulator
Tax=BJP_IG2069_Synergistales_47_25
BSR_Lac_LFCR_na_at_38746_12
Defluviitoga tunisiensis, Defluviitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(10518..11996)
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) RepID=A8F4W5_THELT
Uncharacterized protein {ECO:0000313|EMBL:CEP78125.1}; TaxID=1006576 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Defluviitoga.;" source="Defluviitoga tunisiensis.;"
hypothetical protein
BSR_Lac_LFCR_na_at_38746_13
Defluviitoga tunisiensis, Defluviitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(12009..12476)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) RepID=A8F4W6_THELT
Putative membrane protein {ECO:0000313|EMBL:CEP78124.1}; TaxID=1006576 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Defluviitoga.;" source="Defluviitoga tunisiensis.;"
hypothetical protein
BSR_Lac_LFCR_na_at_38746_14
MPF_Thermotogae_50_1627, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(12510..13475)
DNA (966bp) protein (322aa)
Uncharacterized protein UPF0065 n=1 Tax=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) RepID=A8F4W7_THELT
hypothetical protein
Tax=MPF_Thermotogae_50_1627
BSR_Lac_LFCR_na_at_38746_15
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

13832..15226
DNA (1395bp) protein (465aa)
Amino acid carrier protein n=1 Tax=Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA) RepID=I4BXH1_ANAMD
amino acid carrier protein
Amino acid carrier protein {ECO:0000313|EMBL:AFM21978.1}; TaxID=891968 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA).;"
BSR_Lac_LFCR_na_at_38746_16
Thermanaerovibrio acidaminovorans, Thermanaerovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

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15294..16211
DNA (918bp) protein (306aa)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=525903 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermanaerovibrio.;" source="Thermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 /; Su883) (Selenomonas acidaminovorans).;"
Glutaminase n=1 Tax=Thermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 / Su883) RepID=D1B9S5_THEAS
glutaminase
BSR_Lac_LFCR_na_at_38746_17
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(16254..16895)
DNA (642bp) protein (214aa)
Class II aldolase/adducin family protein n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EDK7_AMICL
class II aldolase/adducin family protein
Class II aldolase/adducin family protein {ECO:0000313|EMBL:ADE56639.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_38746_18
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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17005..17619
DNA (615bp) protein (205aa)
NAD(P)H:quinone oxidoreductase, type IV {ECO:0000313|EMBL:EGW35995.1}; EC=1.6.5.2 {ECO:0000313|EMBL:EGW35995.1};; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
NAD(P)H:quinone oxidoreductase, type IV n=1 Tax=Desulfosporosinus sp. OT RepID=G2G2J2_9FIRM
NAD(P)H:quinone oxidoreductase, type IV
BSR_Lac_LFCR_na_at_38746_19
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

17616..18086
DNA (471bp) protein (157aa)
methylated-DNA--protein-cysteine methyltransferase (EC:2.1.1.63)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; O-6-methylguanine-DNA-alkyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EDI4_AMICL
BSR_Lac_LFCR_na_at_38746_20
bacterium UASB14, Bacteria

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comp(18090..18830)
DNA (741bp) protein (247aa)
4Fe-4S ferredoxin, iron-sulfur binding {ECO:0000313|EMBL:GAK52463.1}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
4Fe-4S binding domain-containing protein
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein id=3336486 bin=GWB1_CP_36_13 species=Clostridium saccharoperbutylacetonicum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
BSR_Lac_LFCR_na_at_38746_21
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

18963..19646
DNA (684bp) protein (228aa)
Methyltransferase type 11 n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EDH8_AMICL
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ADE56610.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_38746_22
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

19661..21199
DNA (1539bp) protein (513aa)
Extracellular solute-binding protein family 5 n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EDH7_AMICL
family 5 extracellular solute-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ADE56609.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_38746_23
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

21187..22116
DNA (930bp) protein (310aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EDH6_AMICL
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADE56608.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_38746_24
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

22113..22919
DNA (807bp) protein (269aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EDH5_AMICL
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADE56607.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_38746_25
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

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22916..23734
DNA (819bp) protein (273aa)
Sigma 54 interacting domain protein n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EDH4_AMICL
sigma 54 interacting domain-containing protein
Sigma 54 interacting domain protein {ECO:0000313|EMBL:ADE56606.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_38746_26
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

23736..24422
DNA (687bp) protein (229aa)
ABC transporter related protein n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EDH3_AMICL
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:ADE56605.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_38746_27
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

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24517..25074
DNA (558bp) protein (186aa)
ferritin Dps family protein id=14624285 bin=bin5_DeltaP species=Aminobacterium colombiense genus=Aminobacterium taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=bin5_DeltaP organism_group=Deltaproteobacteria
ferritin Dps family protein
Tax=RBG_16_Caldithrix_48_16_curated
BSR_Lac_LFCR_na_at_38746_28
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25271..25792
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0N7W7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB86240.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
acetyltransferase
BSR_Lac_LFCR_na_at_38746_29
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(25891..26787)
DNA (897bp) protein (299aa)
glutamate formiminotransferase (EC:2.1.2.5)
Glutamate formiminotransferase {ECO:0000313|EMBL:AJQ28002.1}; EC=2.1.2.5 {ECO:0000313|EMBL:AJQ28002.1};; TaxID=1192197 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans JBW45.;"
Glutamate formiminotransferase n=1 Tax=Pelosinus fermentans JBW45 RepID=I9DIQ6_9FIRM
BSR_Lac_LFCR_na_at_38746_30
Anaerobaculum hydrogeniformans, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

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comp(26821..28053)
DNA (1233bp) protein (411aa)
Sodium/glutamate symporter n=1 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3KZU8_9BACT
Sodium/glutamate symporter {ECO:0000313|EMBL:EFD25234.1}; TaxID=592015 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum hydrogeniformans ATCC BAA-1850.;"
sodium--glutamate symport carrier GltS
Displaying items 1-30 of 47 in total

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