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PW_scaffold_102

Alias: PW_UNK_103

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PW_scaffold_102_1
Methanobacterium sp. MB1, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(384..647)
DNA (264bp) protein (88aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1379702 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteri
hypothetical protein
CRISPR-associated endoribonuclease Cas2
PW_scaffold_102_2
BJP_IG2069_Methanobacteriales_33_27, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(935..1903)
DNA (969bp) protein (323aa)
cas1; CRISPR-associated endonuclease Cas1 (EC:3.1.-.-)
CRISPR-associated endonuclease Cas1
Tax=BJP_IG2069_Methanobacteriales_33_27
PW_scaffold_102_3
BJP_IG2069_Methanobacteriales_33_27, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1911..2429)
DNA (519bp) protein (173aa)
CRISPR-associated protein Cas4
CRISPR-associated protein Cas4
Tax=BJP_IG2069_Methanobacteriales_33_27
PW_scaffold_102_4
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists

comp(2496..4961)
DNA (2466bp) protein (822aa)
cas3; crispr-associated helicase Cas3; K07012 Tax=Altiarchaeum hamiconexum
CRISPR-associated helicase Cas3
Predicted helicase
PW_scaffold_102_5
Methanotorris formicicus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(4936..5652)
DNA (717bp) protein (239aa)
CRISPR-associated protein Cas5, Hmari subtype {ECO:0000313|EMBL:EHP85063.1}; TaxID=647171 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanotorris.;" source
CRISPR-associated protein Cas5, Hmari subtype
CRISPR-associated protein Cas5, Hmari subtype
PW_scaffold_102_6
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists

comp(5665..6657)
DNA (993bp) protein (331aa)
csh2; crispr-associated protein, Csh2 family Tax=Altiarchaeum hamiconexum
CRISPR-associated protein, Csh2 family
CRISPR-associated protein, Csh2 family
PW_scaffold_102_7
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists

comp(6660..8486)
DNA (1827bp) protein (609aa)
csh1; crispr-associated protein Tax=Altiarchaeum hamiconexum
CRISPR-associated protein, Csh1 family
CRISPR-associated protein, Csh1 family
PW_scaffold_102_8
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8488..9150)
DNA (663bp) protein (221aa)
CRISPR-associated protein Cas6
CRISPR-associated endoribonuclease {ECO:0000256|PIRNR:PIRNR005054}; TaxID=2162 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Me
CRISPR-associated protein Cas6
PW_scaffold_102_9
unknown

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comp(9918..10289)
DNA (372bp) protein (124aa)
PW_scaffold_102_10
Methanothermobacter sp. CaT2, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10516..10830)
DNA (315bp) protein (105aa)
Uncharacterized protein {ECO:0000313|EMBL:BAM71001.1}; TaxID=866790 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanothe
Uncharacterized protein ORF3'
PW_scaffold_102_11
Methanothermobacter marburgensis, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

10928..12853
DNA (1926bp) protein (642aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL58334.1}; TaxID=79929 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanother
Uncharacterized protein
PW_scaffold_102_12
unknown

Not on your lists

comp(13481..13675)
DNA (195bp) protein (65aa)
PW_scaffold_102_13
unknown

Not on your lists

comp(13781..13927)
DNA (147bp) protein (49aa)
PW_scaffold_102_14
unknown

Not on your lists

comp(14047..14241)
DNA (195bp) protein (65aa)
PW_scaffold_102_15
BJP_IG2069_Methanobacteriales_33_27, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

14832..15347
DNA (516bp) protein (172aa)
hypothetical protein
Putative uncharacterized protein
Tax=BJP_IG2069_Methanobacteriales_33_27
PW_scaffold_102_16
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15337..15936)
DNA (600bp) protein (200aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG18703.1}; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacter
Putative uncharacterized protein
PW_scaffold_102_17
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(15914..18928)
DNA (3015bp) protein (1005aa)
hsdR1; type I restriction-modification enzyme, subunit R (EC:3.1.21.3); K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] Tax=CG_Omnitr_02
type I restriction enzyme
Predicted type I restriction-modification enzyme, subunit R
PW_scaffold_102_18
Thermococcus barophilus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(18944..20170)
DNA (1227bp) protein (409aa)
Type I restriction-modification system specificity subunit S
Type I restriction-modification system specificity subunit S {ECO:0000313|EMBL:ADT84568.1}; TaxID=391623 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;"
Type I restriction-modification system specificity subunit S
PW_scaffold_102_19
Methanothermobacter marburgensis, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20167..21699)
DNA (1533bp) protein (511aa)
hsdM1; type I restriction-modification enzyme, subunit M (EC:3.1.21.3)
Predicted type I restriction-modification enzyme, subunit M {ECO:0000313|EMBL:ADL58916.1}; EC=3.1.21.3 {ECO:0000313|EMBL:ADL58916.1};; TaxID=79929 species="Archaea; Euryarchaeota; Methanobacteria; Met
Type I restriction modification enzyme, subunit M
PW_scaffold_102_20
Methanothermobacter sp. CaT2, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22073..22837)
DNA (765bp) protein (255aa)
ABC transporter permease subunit {ECO:0000313|EMBL:BAM70233.1}; TaxID=866790 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="M
hypothetical protein
Predicted ABC transporter, permease component
PW_scaffold_102_21
Methanothermobacter marburgensis, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22897..23832)
DNA (936bp) protein (312aa)
ABC transporter, ATPase component
Predicted ABC transporter, ATPase component {ECO:0000313|EMBL:ADL59055.1}; TaxID=79929 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;"
Predicted ABC transporter, ATPase component
PW_scaffold_102_22
unknown

Not on your lists

25777..26484
DNA (708bp) protein (236aa)
PW_scaffold_102_23
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

27363..27899
DNA (537bp) protein (179aa)
circadian clock protein KaiC
Conserved protein {ECO:0000313|EMBL:AAB85583.1}; TaxID=187420 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanothermobac
Conserved protein
Displaying 23 items

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