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PW_scaffold_270

Alias: PW_UNK_271

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PW_scaffold_270_1
unknown

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comp(57..614)
-----------------
DNA (558bp)
protein (186aa)
PW_scaffold_270_2
Desulfurococcus mucosus, Desulfurococcus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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comp(799..1083)
-----------------
DNA (285bp)
protein (95aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=765177 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales;
Cas2 family CRISPR-associated protein
CRISPR-associated endoribonuclease Cas2
PW_scaffold_270_3
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1134..2138)
-----------------
DNA (1005bp)
protein (335aa)
CRISPR-associated endonuclease Cas1 1 {ECO:0000255|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_01470};; TaxID=323259 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiale
CRISPR-associated Cas1 family protein
CRISPR-associated endonuclease Cas1 1
PW_scaffold_270_4
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2153..2809)
-----------------
DNA (657bp)
protein (219aa)
Uncharacterized protein {ECO:0000313|EMBL:KKF98655.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina maze
hypothetical protein
Uncharacterized protein
PW_scaffold_270_5
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(2824..4044)
-----------------
DNA (1221bp)
protein (407aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAB85565.1}; TaxID=187420 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanothe
CRISPR-associated protein TIGR02710 family
PW_scaffold_270_6
Methanocaldococcus vulcanius, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(4041..5177)
-----------------
DNA (1137bp)
protein (379aa)
Csm5 family CRISPR-associated RAMP protein
CRISPR-associated RAMP protein, Csm5 family {ECO:0000313|EMBL:ACX73082.1}; TaxID=579137 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" sou
CRISPR-associated RAMP protein Csm5 family
PW_scaffold_270_7
Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5174..6166)
-----------------
DNA (993bp)
protein (331aa)
CRISPR-associated ramp protein, csm4 family
CRISPR-associated RAMP protein, Csm4 family {ECO:0000313|EMBL:ADQ47327.1}; TaxID=632348 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae S
CRISPR-associated RAMP protein Csm4 family
PW_scaffold_270_8
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(6163..6933)
-----------------
DNA (771bp)
protein (257aa)
csm3; CRISPR-associated RAMP Csm3 family protein
CRISPR-associated RAMP protein, Csm3 family {ECO:0000313|EMBL:ABB14673.1}; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;"
CRISPR-associated RAMP protein, Csm3 family
PW_scaffold_270_9
Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008), Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6945..7337)
-----------------
DNA (393bp)
protein (131aa)
csm2; CRISPR-associated Csm2 family protein
CRISPR-associated protein, Csm2 family
PW_scaffold_270_10
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

comp(7334..9727)
-----------------
DNA (2394bp)
protein (798aa)
CRISPR-associated protein Csm1 family {ECO:0000313|EMBL:BAL59384.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
CRISPR-associated protein, Csm1 family
CRISPR-associated protein Csm1 family
PW_scaffold_270_11
Methanosarcina sp. 1.H.T.1A.1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9796..10602)
-----------------
DNA (807bp)
protein (269aa)
Shikimate 5-dehydrogenase I alpha (EC:1.1.1.25)
Shikimate dehydrogenase {ECO:0000313|EMBL:KKH98875.1}; TaxID=1483602 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina s
Shikimate dehydrogenase
PW_scaffold_270_12
Pyrococcus sp. ST04, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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11460..11804
-----------------
DNA (345bp)
protein (115aa)
Ribonuclease P protein component 4 {ECO:0000256|HAMAP-Rule:MF_00757}; Short=RNase P component 4 {ECO:0000256|HAMAP-Rule:MF_00757};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00757};; Rpp21 {ECO:0000256|H
ribonuclease P protein component 4
Ribonuclease P protein component 4
PW_scaffold_270_13
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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11773..13794
-----------------
DNA (2022bp)
protein (674aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=1110509 species="Archaea;
methionyl-tRNA synthetase
Methionine--tRNA ligase
Displaying 13 items

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