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PW_scaffold_329

Alias: PW_UNK_330

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PW_scaffold_329_1
unknown

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3..137
-----------------
DNA (135bp)
protein (45aa)
PW_scaffold_329_2
Geoglobus acetivorans, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(230..916)
-----------------
DNA (687bp)
protein (229aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY91054.1}; TaxID=565033 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus acetivorans.;"
Uncharacterized protein
PW_scaffold_329_3

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comp(921..1445)
-----------------
DNA (525bp)
protein (175aa)
Marine sediment metagenome DNA, contig: S01H1_C00479 {ECO:0000313|EMBL:GAF77966.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Uncharacterized protein
PW_scaffold_329_4
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(1445..1924)
-----------------
DNA (480bp)
protein (160aa)
hypothetical protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
hypothetical protein
Uncharacterized protein
PW_scaffold_329_5
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

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comp(1993..2190)
-----------------
DNA (198bp)
protein (66aa)
alias=gwa2_scaffold_588_63 id=5044561 tax=GW2011_AR10 organism_desc=gwa2_.44_58 (temp)
Tax=RBG_13_Euryarchaeota_31_8_curated
PW_scaffold_329_6
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

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2310..2654
-----------------
DNA (345bp)
protein (115aa)
HTH-type transcriptional regulator ytfH Tax=RBG_13_Euryarchaeota_31_8_curated
transcriptional regulator, HxlR family
Putative HTH-type transcriptional regulator ytfH
PW_scaffold_329_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(3035..3649)
-----------------
DNA (615bp)
protein (205aa)
cytoplasmic protein
Putative cytoplasmic protein {ECO:0000313|EMBL:ACY49400.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
Putative cytoplasmic protein
PW_scaffold_329_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(3697..4935)
-----------------
DNA (1239bp)
protein (413aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
DNA methylase N-4/N-6 domain-containing protein rbh
DNA methylase N-4/N-6 domain protein
PW_scaffold_329_9
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(5144..5623)
-----------------
DNA (480bp)
protein (160aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN25557.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source
PW_scaffold_329_10
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(5630..5896)
-----------------
DNA (267bp)
protein (89aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN25557.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source
PW_scaffold_329_11

Not on your lists

comp(5899..6288)
-----------------
DNA (390bp)
protein (130aa)
Marine sediment metagenome DNA, contig: S03H2_S02326 {ECO:0000313|EMBL:GAH60072.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
PW_scaffold_329_12
unknown

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comp(6300..6515)
-----------------
DNA (216bp)
protein (72aa)
PW_scaffold_329_13
unknown

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comp(6525..7079)
-----------------
DNA (555bp)
protein (185aa)
PW_scaffold_329_14
unknown

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7169..7465
-----------------
DNA (297bp)
protein (99aa)
PW_scaffold_329_15
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7899..8513)
-----------------
DNA (615bp)
protein (205aa)
imidazole glycerol phosphate synthase subunit hisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-
Imidazole glycerol phosphate synthase subunit HisH
PW_scaffold_329_16
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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8602..9084
-----------------
DNA (483bp)
protein (161aa)
rps6e; 30D ribosomal protein S6E
30S ribosomal protein S6e {ECO:0000256|HAMAP-Rule:MF_00512, ECO:0000256|SAAS:SAAS00018829}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanoce
30S ribosomal protein S6e
PW_scaffold_329_17
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9087..9431)
-----------------
DNA (345bp)
protein (115aa)
PadR-like family transcriptional regulator
PadR-like family transcriptional regulator {ECO:0000313|EMBL:BAI61269.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Meth
PadR-like family transcriptional regulator
PW_scaffold_329_18
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9486..10331)
-----------------
DNA (846bp)
protein (282aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH60349.1}; Flags: Precursor;; TaxID=679901 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosalsum.;" source=
Putative uncharacterized protein
PW_scaffold_329_19
Methanosarcina sp. WH1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(10969..11436)
-----------------
DNA (468bp)
protein (156aa)
PIN domain protein {ECO:0000313|EMBL:AKB22192.1}; TaxID=1434102 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WH
hypothetical protein
Probable ribonuclease VapC
Displaying 19 items

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