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PW_scaffold_136

Alias: PW_Methanobacteriaceae_41_3580_6

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PW_scaffold_136_1
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(3..713)
DNA (711bp) protein (237aa)
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase {ECO:0000256|HAMAP-Rule:MF_01921}; EC=4.1.3.44 {ECO:0000256|HAMAP-Rule:MF_01921};; tRNA wyosine derivatives biosynthesis protein Taw1
wyosine base formation domain-containing protein
Wyosine base formation domain protein
PW_scaffold_136_2
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

946..1620
DNA (675bp) protein (225aa)
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000255|HAMAP-Rule:MF_00147}; Short=TIM {ECO:0000255|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000255|HAMAP-Rule:MF_00147};; Triose-phosphate isomerase {ECO:0000255|HAMAP-
Triosephosphate isomerase
PW_scaffold_136_3
BJP_IG2069_Methanobacteriales_33_27, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

1648..2862
DNA (1215bp) protein (405aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase
Tax=BJP_IG2069_Methanobacteriales_33_27
PW_scaffold_136_4
BJP_IG2069_Methanobacteriales_33_27, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

3684..3917
DNA (234bp) protein (78aa)
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
DNA-directed RNA polymerase subunit H
Tax=BJP_IG2069_Methanobacteriales_33_27
PW_scaffold_136_5
Methanothermobacter marburgensis, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

3944..5488
DNA (1545bp) protein (515aa)
rpoB1; DNA-directed RNA polymerase, subunit B'' (EC:2.7.7.6)
DNA-directed RNA polymerase, subunit B {ECO:0000313|EMBL:ADL59018.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ADL59018.1};; TaxID=79929 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Metha
DNA-directed RNA polymerase subunit B''
PW_scaffold_136_6
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

5507..7312
DNA (1806bp) protein (602aa)
DNA-directed RNA polymerase subunit B'; EC=2.7.7.6;; TaxID=79930 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanothermo
DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit B'
PW_scaffold_136_7
RBG_16_Euryarchaeota_62_10_curated, Euryarchaeota, Archaea

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7339..10479
DNA (3141bp) protein (1047aa)
rpoA1; DNA-directed RNA polymerase, subunit A' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6) Tax=RBG_16_Euryarchaeota_62_10_curated
DNA-directed RNA polymerase subunit A'
PW_scaffold_136_8
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

10488..11660
DNA (1173bp) protein (391aa)
DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A''; EC=2.7.7.6;; TaxID=187420 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanother
DNA-directed RNA polymerase subunit A''
PW_scaffold_136_9
Methanothermobacter sp. CaT2, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists


11661..11957
DNA (297bp) protein (99aa)
50S ribosomal protein L30
50S ribosomal protein L30e {ECO:0000256|HAMAP-Rule:MF_00481}; TaxID=866790 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Met
50S ribosomal protein L30e
PW_scaffold_136_10
Methanothermobacter marburgensis, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

11963..12394
DNA (432bp) protein (144aa)
nusA; transcription termination factor
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=79929 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermob
Transcription termination factor NusA
PW_scaffold_136_11
Methanothermobacter marburgensis, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists


12413..12838
DNA (426bp) protein (142aa)
rps12p; 30S ribosomal protein S12P
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=79929 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Metha
30S ribosomal protein S12
PW_scaffold_136_12
Methanothermobacter marburgensis, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists


12844..13404
DNA (561bp) protein (187aa)
rps7p; 30S ribosomal protein S7P
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480, ECO:0000256|RuleBase:RU003621}; TaxID=79929 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methan
30S ribosomal protein S7
PW_scaffold_136_13
Methanothermobacter sp. CaT2, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

13433..15607
DNA (2175bp) protein (725aa)
Elongation factor 2 {ECO:0000256|HAMAP-Rule:MF_00054, ECO:0000256|SAAS:SAAS00088569}; Short=EF-2 {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=866790 species="Archaea; Euryarchaeota; Methanobacteria; Meth
fusA; protein translation elongation factor 2
Elongation factor 2
PW_scaffold_136_14
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

15713..16954
DNA (1242bp) protein (414aa)
ef1a, tuf; elongation factor 1-alpha (EC:3.6.5.3)
Elongation factor 1-alpha {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-1-alpha {ECO:0000255|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000255|HAMAP
Elongation factor 1-alpha
PW_scaffold_136_15
Methanothermobacter sp. CaT2, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists


16989..17297
DNA (309bp) protein (103aa)
rps10p; 30S ribosomal protein S10P
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=866790 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Meth
30S ribosomal protein S10
PW_scaffold_136_16
Methanothermobacter sp. CaT2, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

17452..17871
DNA (420bp) protein (140aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM70216.1}; TaxID=866790 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanothe
Putative uncharacterized protein
PW_scaffold_136_17
Methanothermobacter marburgensis, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17868..19004)
DNA (1137bp) protein (379aa)
O-phospho-L-seryl-tRNA:Cys-tRNA synthase {ECO:0000256|HAMAP-Rule:MF_01675}; EC=2.5.1.73 {ECO:0000256|HAMAP-Rule:MF_01675};; Sep-tRNA:Cys-tRNA synthase {ECO:0000256|HAMAP-Rule:MF_01675}; TaxID=79929 sp
pscS; Sep-tRNA:Cys-tRNA synthase
O-phospho-L-seryl-tRNA:Cys-tRNA synthase
PW_scaffold_136_18
Methanothermobacter marburgensis, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19004..19516)
DNA (513bp) protein (171aa)
Nucleoside-triphosphatase MTBMA_c14560 {ECO:0000256|HAMAP-Rule:MF_00796}; Short=NTPase {ECO:0000256|HAMAP-Rule:MF_00796};; EC=3.6.1.15 {ECO:0000256|HAMAP-Rule:MF_00796};; Nucleoside triphosphate phosp
nucleotide kinase related protein
Nucleoside-triphosphatase MTBMA_c14560
PW_scaffold_136_19
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19534..20526)
DNA (993bp) protein (331aa)
radical SAM domain-containing protein rbh
Radical SAM domain protein {ECO:0000313|EMBL:ADP77933.1}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus
Radical SAM domain protein
PW_scaffold_136_20
BJP_IG2069_Methanobacteriales_33_27, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20558..21913)
DNA (1356bp) protein (452aa)
hypothetical protein
Conserved protein
Tax=BJP_IG2069_Methanobacteriales_33_27
PW_scaffold_136_21
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21855..22538)
DNA (684bp) protein (228aa)
phosphoglycolate phosphatase (EC:3.1.3.18)
Phosphoglycolate phosphatase {ECO:0000255|HAMAP-Rule:MF_01419}; Short=PGP {ECO:0000255|HAMAP-Rule:MF_01419};; Short=PGPase {ECO:0000255|HAMAP-Rule:MF_01419};; EC=3.1.3.18 {ECO:0000255|HAMAP-Rule:MF_01
Phosphoglycolate phosphatase
PW_scaffold_136_22
Methanothermobacter marburgensis, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22549..23628)
DNA (1080bp) protein (360aa)
hypD; hydrogenase expression/formation protein HypD
Predicted hydrogenase expression/formation protein HypD {ECO:0000313|EMBL:ADL59039.1}; TaxID=79929 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothe
Predicted hydrogenase expression/formation protein HypD
PW_scaffold_136_23

Not on your lists

comp(23689..24039)
DNA (351bp) protein (117aa)
Marine sediment metagenome DNA, contig: S01H4_C02567 {ECO:0000313|EMBL:GAG64123.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
Putative membrane protein
Displaying 23 items

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