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PW_scaffold_150

Alias: PW_Desulfonauticus_38_2803_34

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PW_scaffold_150_1
Desulfonatronospira thiodismutans, Desulfonatronospira, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1461
DNA (1461bp) protein (487aa)
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EFI34860.1}; TaxID=555779 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfonatron
methyl-accepting chemotaxis sensory transducer with Cache sensor
Methyl-accepting chemotaxis sensory transducer
PW_scaffold_150_2
Desulfovibrio aespoeensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1466..3130)
DNA (1665bp) protein (555aa)
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ADU61940.1}; TaxID=643562 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio
Diguanylate cyclase
PW_scaffold_150_3
unknown

Not on your lists

comp(3175..3519)
DNA (345bp) protein (115aa)
PW_scaffold_150_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(3550..5790)
DNA (2241bp) protein (747aa)
cation/multidrug efflux pump of the AcrB/AcrD/AcrF family
Putative cation/multidrug efflux pump of the AcrB/AcrD/AcrF family {ECO:0000313|EMBL:CBE68983.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candid
Putative cation/multidrug efflux pump of the AcrB/AcrD/AcrF family
PW_scaffold_150_5
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5937..6731)
DNA (795bp) protein (265aa)
acriflavin resistance protein
Acriflavin resistance protein
Tax=BJP_08E140C01_Desulfomicrobium_58_14
PW_scaffold_150_6
Sulfurihydrogenibium sp. YO3AOP1, Sulfurihydrogenibium, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(6718..7842)
DNA (1125bp) protein (375aa)
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACD67345.1}; TaxID=436114 species="Bacteria; Aquificae; Aquificales; Hydrogenothermaceae; Sulfurihydrogenibium.;" source="Sulfurihydrogeni
Efflux transporter, RND family, MFP subunit
PW_scaffold_150_7
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7932..8531)
DNA (600bp) protein (200aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV67974.1}; TaxID=485915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfohalobium.;" source="Desulfoha
Uncharacterized protein
PW_scaffold_150_8
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8519..9043)
DNA (525bp) protein (175aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=485915 species="Bacteria; Proteobacteria; Deltapr
shikimate kinase
Shikimate kinase
PW_scaffold_150_9
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9044..9772)
DNA (729bp) protein (243aa)
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACU88642.1}; TaxID=525897 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiaceae; Desulfomicrobium.;" source="Desulfo
ABC transporter related
PW_scaffold_150_10
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9772..10539)
DNA (768bp) protein (256aa)
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACU88643.1}; TaxID=525897 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiaceae; Desulfomicrobium.;" source="Desulfo
ABC transporter related
PW_scaffold_150_11
Desulfonatronum thiodismutans, Desulfonatronum, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10551..11564)
DNA (1014bp) protein (338aa)
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:AIE20177.1}; TaxID=159290 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfonatronumaceae; Desulfo
inner-membrane translocator
Inner-membrane translocator
PW_scaffold_150_12
Desulfovibrio salexigens, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11585..12511)
DNA (927bp) protein (309aa)
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ACS80996.1}; TaxID=526222 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulf
Inner-membrane translocator
PW_scaffold_150_13
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12596..13759)
DNA (1164bp) protein (388aa)
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EPR39159.1}; Flags: Precursor;; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Des
extracellular ligand-binding receptor rbh
Amino acid/amide ABC transporter substrate-binding protein, HAAT family
PW_scaffold_150_14
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14043..14669
DNA (627bp) protein (209aa)
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isom
phosphoheptose isomerase
Phosphoheptose isomerase
PW_scaffold_150_15
Desulfonatronospira thiodismutans, Desulfonatronospira, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14670..14921
DNA (252bp) protein (84aa)
FmdB family regulatory protein
Regulatory protein, FmdB family {ECO:0000313|EMBL:EFI34692.1}; TaxID=555779 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfonatronospira.;" sourc
Regulatory protein, FmdB family
PW_scaffold_150_16
Desulfonatronospira thiodismutans, Desulfonatronospira, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14933..15862
DNA (930bp) protein (310aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAM
porphobilinogen deaminase (EC:2.5.1.61) rbh
Porphobilinogen deaminase
PW_scaffold_150_17
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(15891..17117)
DNA (1227bp) protein (409aa)
hypothetical protein Tax=RBG_13_Nitrospirae_43_8_curated
hypothetical protein
Putative uncharacterized protein
PW_scaffold_150_18
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17202..17942)
DNA (741bp) protein (247aa)
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408}
thyX; FAD-dependent thymidylate synthase
Thymidylate synthase ThyX
PW_scaffold_150_19
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17945..18925)
DNA (981bp) protein (327aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=525897 species="Bacteria; Proteobacteria; Deltaproteobacteria
Holliday junction DNA helicase RuvB
Holliday junction ATP-dependent DNA helicase RuvB
PW_scaffold_150_20
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18922..19521)
DNA (600bp) protein (200aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
ruvA; Holliday junction DNA helicase RuvA
Holliday junction ATP-dependent DNA helicase RuvA
PW_scaffold_150_21
Desulfonatronum thiodismutans, Desulfonatronum, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19518..20009)
DNA (492bp) protein (164aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC
PW_scaffold_150_22
Desulfonatronospira thiodismutans, Desulfonatronospira, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20009..20755)
DNA (747bp) protein (249aa)
Probable transcriptional regulatory protein Dthio_PD0598 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=555779 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae;
hypothetical protein
Probable transcriptional regulatory protein Dthio_PD0598
PW_scaffold_150_23
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20772..21359)
DNA (588bp) protein (196aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547};
ribosomal RNA methyltransferase RrmJ/FtsJ
Ribosomal RNA large subunit methyltransferase E
Displaying 23 items

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