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PW_scaffold_166

Alias: PW_archaea_test_43_689_9

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PW_scaffold_166_1
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

1..2112
DNA (2112bp) protein (704aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Th
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
DNA-directed RNA polymerase
PW_scaffold_166_2
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

2119..3306
DNA (1188bp) protein (396aa)
DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A'' {ECO:0000256|HAMAP-Rule:MF_00411}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00411};; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; The
DNA-directed RNA polymerase subunit A''
PW_scaffold_166_3
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


3320..3622
DNA (303bp) protein (101aa)
50S ribosomal protein L30
50S ribosomal protein L30e {ECO:0000256|HAMAP-Rule:MF_00481}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis
50S ribosomal protein L30e
PW_scaffold_166_4
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

3625..4062
DNA (438bp) protein (146aa)
transcription elongation factor NusA
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="T
NusA like protein
PW_scaffold_166_5
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


4073..4516
DNA (444bp) protein (148aa)
30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;"
30S ribosomal protein S12
PW_scaffold_166_6
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


4522..5169
DNA (648bp) protein (216aa)
30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (
30S ribosomal protein S7
PW_scaffold_166_7
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(5221..6342)
DNA (1122bp) protein (374aa)
phosphodiesterase
Phosphodiesterase {ECO:0000313|EMBL:EHR78681.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (strain ATCC
Phosphodiesterase
PW_scaffold_166_8
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(6396..7631)
DNA (1236bp) protein (412aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHR78680.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (strai
Uncharacterized protein
PW_scaffold_166_9
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(7924..9024)
DNA (1101bp) protein (367aa)
threonine synthase (EC:4.2.3.1)
Threonine synthase {ECO:0000313|EMBL:EHR78679.1}; EC=4.2.3.1 {ECO:0000313|EMBL:EHR78679.1};; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;"
Threonine synthase
PW_scaffold_166_10
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

9040..9873
DNA (834bp) protein (278aa)
Uridine phosphorylase {ECO:0000256|RuleBase:RU361131}; EC=2.4.2.3 {ECO:0000256|RuleBase:RU361131};; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermoco
uridine phosphorylase
Uridine phosphorylase
PW_scaffold_166_11
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

10107..10307
DNA (201bp) protein (67aa)
50S ribosomal protein L40
50S ribosomal protein L40e {ECO:0000256|HAMAP-Rule:MF_00788}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus
50S ribosomal protein L40e
PW_scaffold_166_12
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(10310..10633)
DNA (324bp) protein (108aa)
PadR family transcriptional regulator
PadR family transcriptional regulator {ECO:0000313|EMBL:EHR78676.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus li
Transcription regulator, PadR-like family protein
PW_scaffold_166_13
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

10786..11085
DNA (300bp) protein (100aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHR78675.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (strai
Uncharacterized protein
PW_scaffold_166_14
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

11110..12432
DNA (1323bp) protein (441aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS89472.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strai
Uncharacterized protein
PW_scaffold_166_15
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(12404..13159)
DNA (756bp) protein (252aa)
phosphatase-like protein
Phosphatase-like protein {ECO:0000313|EMBL:EHR78673.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (stra
Uncharacterized protein
PW_scaffold_166_16
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

13592..14677
DNA (1086bp) protein (362aa)
aminopeptidase
Aminopeptidase P {ECO:0000313|EMBL:ACS89473.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strain MM 73
Aminopeptidase P
PW_scaffold_166_17
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(14663..16180)
DNA (1518bp) protein (506aa)
amidohydrolase rbh
Amidohydrolase {ECO:0000313|EMBL:EHR78668.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (strain ATCC 51
Metal-dependent hydrolase with the TIM-barrel fold protein
PW_scaffold_166_18
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

16377..17279
DNA (903bp) protein (301aa)
cell division protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococ
Signal recognition particle receptor FtsY
PW_scaffold_166_19
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

17282..17914
DNA (633bp) protein (211aa)
membrane protein
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (st
Small neutral amino acid transporter
PW_scaffold_166_20
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

17951..18745
DNA (795bp) protein (265aa)
ABC transporter
ABC transporter {ECO:0000313|EMBL:EHR79187.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (strain ATCC 5
ABC transporter ATP-binding protein
PW_scaffold_166_21
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

18742..19563
DNA (822bp) protein (274aa)
ABC transporter rbh
ABC transporter {ECO:0000313|EMBL:EHR79188.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (strain ATCC 5
Zinc ABC transporter permease
PW_scaffold_166_22
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

19568..19729
DNA (162bp) protein (54aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052};; TaxID=523849 species="Archaea; Euryarchaeota; Th
ribonuclease HII
Ribonuclease HII
Displaying 22 items

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