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PW_scaffold_180

Alias: PW_archaea_test_43_689_11

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PW_scaffold_180_1
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

2..1759
DNA (1758bp) protein (586aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHR79212.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (strai
Uncharacterized protein
PW_scaffold_180_2
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

1820..2176
DNA (357bp) protein (119aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00628}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00628};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00628};; TaxID=523849 species="Archaea; Euryarchaeota; T
Peptidyl-tRNA hydrolase
PW_scaffold_180_3
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

2186..3454
DNA (1269bp) protein (423aa)
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud
tRNA pseudouridine synthase D
Probable tRNA pseudouridine synthase D
PW_scaffold_180_4
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

3465..4163
DNA (699bp) protein (233aa)
Phosphoglycolate phosphatase {ECO:0000256|HAMAP-Rule:MF_01419}; Short=PGP {ECO:0000256|HAMAP-Rule:MF_01419};; Short=PGPase {ECO:0000256|HAMAP-Rule:MF_01419};; EC=3.1.3.18 {ECO:0000256|HAMAP-Rule:MF_01
phosphoglycolate phosphatase rbh
Phosphoglycolate phosphatase
PW_scaffold_180_5
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(4160..4909)
DNA (750bp) protein (250aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|RuleBase:RU000512};; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococ
orotidine 5-phosphate decarboxylase
Orotidine 5'-phosphate decarboxylase
PW_scaffold_180_6
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(4909..5829)
DNA (921bp) protein (307aa)
dihydroorotate dehydrogenase rbh
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule
Dihydroorotate dehydrogenase
PW_scaffold_180_7
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(5814..6515)
DNA (702bp) protein (234aa)
dihydroorotate dehydrogenase
Dihydroorotate dehydrogenase {ECO:0000313|EMBL:EHR79218.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (
Dihydroorotate dehydrogenase electron transfer subunit
PW_scaffold_180_8
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(6512..7777)
DNA (1266bp) protein (422aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=523849 species="Archaea; Euryarchaeota; Thermoco
dihydroorotase
Dihydroorotase, multifunctional complex type
PW_scaffold_180_9
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(7777..8229)
DNA (453bp) protein (151aa)
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase regulatory chain {ECO:0000255|HAMAP-Rule:MF_00002}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="T
Aspartate carbamoyltransferase regulatory chain
PW_scaffold_180_10
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(8226..9146)
DNA (921bp) protein (307aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=523849 species="Arc
aspartate carbamoyltransferase
Aspartate carbamoyltransferase
PW_scaffold_180_11
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

9225..9791
DNA (567bp) protein (189aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rul
orotate phosphoribosyltransferase
Orotate phosphoribosyltransferase
PW_scaffold_180_12
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(9788..10000)
DNA (213bp) protein (71aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHR79223.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (strai
Uncharacterized protein
PW_scaffold_180_13
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

10139..11398
DNA (1260bp) protein (420aa)
SAM-dependent methyltransferase
SAM-dependent methyltransferase {ECO:0000313|EMBL:EHR79224.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litorali
tRNA (Uracil54-C5-)-methyltransferase
PW_scaffold_180_14
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

11452..11877
DNA (426bp) protein (142aa)
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EHR79225.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (str
HTH-type transcriptional regulator Ptr2
PW_scaffold_180_15
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(11994..12335)
DNA (342bp) protein (114aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHR79226.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (strai
Uncharacterized protein
PW_scaffold_180_16
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(12361..13485)
DNA (1125bp) protein (375aa)
sodium:proton antiporter rbh
Sodium:proton antiporter {ECO:0000313|EMBL:EHR79227.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (stra
NapA-type sodium/hydrogen antiporter
PW_scaffold_180_17
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(13487..14629)
DNA (1143bp) protein (381aa)
NapA-type sodium/hydrogen antiporter
NapA-type sodium/hydrogen antiporter {ECO:0000313|EMBL:ACS89517.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sib
NapA-type sodium/hydrogen antiporter
PW_scaffold_180_18
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(14648..15202)
DNA (555bp) protein (185aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHR79228.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (strai
Uncharacterized protein
PW_scaffold_180_19
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

15387..16841
DNA (1455bp) protein (485aa)
FAD-dependent oxidoreductase rbh
FAD-dependent oxidoreductase {ECO:0000313|EMBL:EHR79229.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (
Oxidoreductase
PW_scaffold_180_20
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

16889..17824
DNA (936bp) protein (312aa)
CTU1/ATPBD3 family protein
CTU1/ATPBD3 family protein {ECO:0000313|EMBL:EHR79230.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (st
ATPase, PP-loop superfamily protein
PW_scaffold_180_21
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(17871..18599)
DNA (729bp) protein (243aa)
Cyclodextrin glucanotransferase {ECO:0000313|EMBL:ABW95829.1}; EC=2.4.1.19 {ECO:0000313|EMBL:ABW95829.1};; TaxID=2234 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae;
4-alpha-glucanotransferase
4-alpha-glucanotransferase
Displaying 21 items

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