ggKbase home page

CHLO_5_1592_27

Organism: Chloroflexi genomic scaffolds from RBG 5m depth

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 0 / 38
Location: comp(17249..17434)

Top 3 Functional Annotations

Value Algorithm Source
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RBG_16_Chloroflexi_50_9_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 61.0
  • Bit_score: 123
  • Evalue 8.50e-26
50S ribosomal protein L30 similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 58.0
  • Bit_score: 80
  • Evalue 2.20e-13
50S ribosomal protein L30 n=5 Tax=Dehalococcoides mccartyi RepID=RL30_DEHE1 (db=UNIREF evalue=2.7e-13 bit_score=79.7 identity=63.8 coverage=91.93548387096774) similarity UNIREF
DB: UNIREF
  • Identity: 63.0
  • Coverage: 91.0
  • Bit_score: 79
  • Evalue 2.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Chloroflexi_50_9_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 186
ATGAGTAGATTAAAAATCACCTGGATTAAAAGCGGCATCGGCTACGAGAAGAGCCAGAAGCGAACCATAGCCGCGTTAGGCTTTCATCGGTTGAATCAGAGCGTTGTCCACGAAGATTCAGGCGCGATCCGAGGTATGATCAATAAAATAAGACACCTGGTAAAGGTGGAGGAAGAGAGTGGTTAG
PROTEIN sequence
Length: 62
MSRLKITWIKSGIGYEKSQKRTIAALGFHRLNQSVVHEDSGAIRGMINKIRHLVKVEEESG*