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Chloroflexi genomic scaffolds from RBG 5m depth

rbg_Chloroflexi_57_1
In projects: rbg

Consensus taxonomy: Chloroflexi  →  Bacteria

Displaying items 2251-2300 of 2681 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
CHLO_5_2112 16ftChloro_30654
Species: CG_Anaero_04 (57.14%)
14 12479 bp 57.10 1.00 0.00
CHLO_5_2368 16ftChloro_44596
Phylum: Chloroflexi (53.85%)
13 12586 bp 50.34 1.00 0.00
CHLO_5_2624 16ftChloro_89688
Species: RBG_16_Gammaproteobacteria_66_13_curated (60%)
10 12193 bp 65.41 1.00 0.00
CHLO_5_66 16ftChloro_756
Phylum: Chloroflexi (72.12%)
104 124635 bp 65.62 1.00 0.00
CHLO_5_322 16ftChloro_2763
Phylum: Chloroflexi (77.59%)
58 65058 bp 67.41 1.00 0.00
CHLO_5_578 16ftChloro_4661
Phylum: Chloroflexi (83.33%)
24 20748 bp 52.41 1.00 0.00
CHLO_5_834 16ftChloro_6903
Species: RBG_16_Chloroflexi_54_18_curated (84.21%)
19 18723 bp 51.09 1.00 0.00
CHLO_5_1090 16ftChloro_9708
Species: RBG_16_Chloroflexi_51_16_curated (92.59%)
27 24550 bp 51.68 1.00 0.00
CHLO_5_1345 16ftChloro_12856
Species: RBG_19FT_COMBO_Chloroflexi_49_13_curated (70.37%)
27 25198 bp 48.06 1.00 0.00
CHLO_5_1601 16ftChloro_17052
Phylum: Chloroflexi (58.82%)
17 10439 bp 57.59 1.00 0.00
CHLO_5_1857 16ftChloro_22354
Phylum: Chloroflexi (90%)
10 12739 bp 46.20 1.00 0.00
CHLO_5_2113 16ftChloro_30765
Species: RBG_16_RIF_CHLX_69_14_curated (88%)
25 22954 bp 68.36 1.00 0.00
CHLO_5_2369 16ftChloro_44622
Phylum: Chloroflexi (64.29%)
14 11508 bp 63.25 1.00 0.00
CHLO_5_2625 16ftChloro_89747
Species: RBG_16_Chloroflexi_60_22_curated (81.25%)
16 10788 bp 60.28 1.00 0.00
CHLO_5_67 16ftChloro_770
Species: RBG_16_Chloroflexi_56_11_curated (92.37%)
131 125769 bp 57.74 1.00 0.00
CHLO_5_323 16ftChloro_2768
Species: RBG_16_Chloroflexi_57_11_curated (97.14%)
35 38021 bp 56.19 1.00 0.00
CHLO_5_579 16ftChloro_4663
Species: RBG_19FT_COMBO_Chloroflexi_56_12_curated (76.92%)
13 14343 bp 54.82 1.00 0.00
CHLO_5_835 16ftChloro_6915
Species: RBG_16_Chloroflexi_63_12_curated (85.71%)
28 23554 bp 63.96 1.00 0.00
CHLO_5_1091 16ftChloro_9740
Species: RBG_16_Chloroflexi_52_11_curated (100%)
18 15775 bp 50.83 1.00 0.00
CHLO_5_1346 16ftChloro_12880
Phylum: Chloroflexi (94.12%)
17 16974 bp 59.66 1.00 0.00
CHLO_5_1602 16ftChloro_17062
Species: RBG_16_Chloroflexi_47_49_curated (50%)
10 11157 bp 47.01 1.00 0.00
CHLO_5_1858 16ftChloro_22363
Phylum: Chloroflexi (65%)
20 25204 bp 67.14 1.00 0.00
CHLO_5_2114 16ftChloro_30796
Domain: Bacteria (75%)
12 11322 bp 62.94 1.00 0.00
CHLO_5_2370 16ftChloro_44675
Species: RBG_16_Gallionellales_56_9_curated (70.59%)
17 16047 bp 57.22 1.00 0.00
CHLO_5_2626 16ftChloro_90702
Domain: Bacteria (92.31%)
13 10420 bp 66.42 1.00 0.00
CHLO_5_68 16ftChloro_772
Species: RBG_16_Chloroflexi_54_18_curated (97.44%)
39 44400 bp 50.92 1.00 0.00
CHLO_5_324 16ftChloro_2769
Species: RBG_16_Chloroflexi_54_11_curated (75%)
16 15615 bp 55.81 1.00 0.00
CHLO_5_580 16ftChloro_4670
Species: RBG_16_Chloroflexi_63_12_curated (88.89%)
18 18379 bp 64.77 1.00 0.00
CHLO_5_836 16ftChloro_6918
Species: RBG_16_Chloroflexi_54_18_curated (100%)
20 17983 bp 49.97 1.00 0.00
CHLO_5_1092 16ftChloro_9747
Phylum: Chloroflexi (50%)
16 19823 bp 60.35 1.00 0.00
CHLO_5_1347 16ftChloro_12888
Species: RBG_16_Gammaproteobacteria_66_13_curated (66.67%)
12 10442 bp 67.28 1.00 0.00
CHLO_5_1603 16ftChloro_17088
Species: RBG_16_Chloroflexi_47_49_curated (76.19%)
21 16375 bp 47.74 1.00 0.00
CHLO_5_1859 16ftChloro_22432
Phylum: Chloroflexi (100%)
15 17415 bp 53.98 1.00 0.00
CHLO_5_2115 16ftChloro_30829
Species: RBG_16_Chloroflexi_57_8_curated (91.3%)
23 18289 bp 57.27 1.00 0.00
CHLO_5_2371 16ftChloro_44694
Species: RBG_19FT_COMBO_Chloroflexi_55_16_curated (80%)
10 12663 bp 52.49 1.00 0.00
CHLO_5_2627 16ftChloro_90948
Phylum: Chloroflexi (91.67%)
12 10577 bp 47.95 1.00 0.00
CHLO_5_69 16ftChloro_778
Species: RBG_19FT_COMBO_Chloroflexi_50_10_curated (74.29%)
35 41022 bp 49.38 1.00 0.00
CHLO_5_325 16ftChloro_2781
Species: RBG_16_Chloroflexi_56_11_curated (94.19%)
86 73732 bp 56.35 1.00 0.00
CHLO_5_581 16ftChloro_4677
Species: CSP1_4_Chloroflexi (96.88%)
32 35437 bp 72.08 1.00 0.00
CHLO_5_837 16ftChloro_6919
Species: RBG_16_Chloroflexi_52_11_curated (86.84%)
38 41953 bp 52.13 1.00 0.00
CHLO_5_1093 16ftChloro_9750
Phylum: Chloroflexi (94.44%)
18 16408 bp 59.07 1.00 0.00
CHLO_5_1348 16ftChloro_12905
Species: RBG_19FT_COMBO_Chloroflexi_55_16_curated (94.44%)
18 10534 bp 52.22 1.00 0.00
CHLO_5_1604 16ftChloro_17096
Species: RBG_16_Chloroflexi_63_12_curated (88.89%)
9 12928 bp 63.66 1.00 0.00
CHLO_5_1860 16ftChloro_22458
Species: RBG_16_Chloroflexi_63_12_curated (94.12%)
17 14039 bp 62.41 1.00 0.00
CHLO_5_2116 16ftChloro_30879
Phylum: Chloroflexi (80.77%)
26 25377 bp 57.56 1.00 0.00
CHLO_5_2372 16ftChloro_44732
Domain: Bacteria (77.78%)
9 10580 bp 63.32 1.00 0.00
CHLO_5_2628 16ftChloro_91983
Domain: Bacteria (61.54%)
13 10698 bp 48.80 1.00 0.00
CHLO_5_70 16ftChloro_795
Phylum: Chloroflexi (89.8%)
49 45555 bp 57.48 1.00 0.00
CHLO_5_326 16ftChloro_2783
Species: RBG_16_Chloroflexi_57_11_curated (86.67%)
60 63583 bp 55.60 1.00 0.00
CHLO_5_582 16ftChloro_4687
Phylum: Chloroflexi (79.31%)
29 27648 bp 58.02 1.00 0.00
Displaying items 2251-2300 of 2681 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.