ggKbase home page

RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400

Search features with annotation key words

Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_1
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(151..771)
-----------------
DNA (621bp)
protein (207aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_2
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(942..1280)
-----------------
DNA (339bp)
protein (113aa)
PemK-like protein n=1 Tax=Synechococcus sp. PCC 7502 RepID=K9SZN5_9SYNE
PemK-like protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
PemK-like protein
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_3
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(1270..1491)
-----------------
DNA (222bp)
protein (74aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_4
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(1659..1946)
-----------------
DNA (288bp)
protein (96aa)
Uncharacterized protein n=1 Tax=Polysphondylium pallidum RepID=D3BPB0_POLPA
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_trna_5
unknown

Not on your lists

comp(1957..2030)
-----------------
DNA (74bp)
transferRNA
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_5
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(2051..3097)
-----------------
DNA (1047bp)
protein (349aa)
adenosine deaminase (EC:3.5.4.4); K01488 adenosine deaminase [EC:3.5.4.4] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
adenosine deaminase (EC:3.5.4.4)
adenine deaminase n=1 Tax=Desulfobacter curvatus RepID=UPI00035DFD4A
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_6
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(3064..3633)
-----------------
DNA (570bp)
protein (190aa)
cytosine/adenosine deaminase Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
Putative deaminase id=4016443 bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
cytosine/adenosine deaminase
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_trna_4
unknown

Not on your lists

comp(3667..3741)
-----------------
DNA (75bp)
transferRNA
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_7
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(3827..4210)
-----------------
DNA (384bp)
protein (128aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_8
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(4243..4455)
-----------------
DNA (213bp)
protein (71aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_9
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

4807..6213
-----------------
DNA (1407bp)
protein (469aa)
glycogen synthase Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
Glycogen synthase id=4030491 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
glycogen synthase
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_10
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(6199..6795)
-----------------
DNA (597bp)
protein (199aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_11
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(6863..7186)
-----------------
DNA (324bp)
protein (108aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_12
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(7295..8818)
-----------------
DNA (1524bp)
protein (508aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T9T9_9ARCH
type I phosphodiesterase/nucleotide pyrophosphatase Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_13
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(8840..10162)
-----------------
DNA (1323bp)
protein (441aa)
adenylosuccinate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
Adenylosuccinate lyase n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7J9S8_9FUSO
adenylosuccinate lyase
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_14
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

10343..11887
-----------------
DNA (1545bp)
protein (515aa)
succinate-semialdehyde dehydrogenase (NAD(P)+); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
aldehyde dehydrogenase n=1 Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B5BA49
succinate-semialdehyde dehydrogenase (NAD(P)+)
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_15
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(11879..12391)
-----------------
DNA (513bp)
protein (171aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_16
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

12917..13198
-----------------
DNA (282bp)
protein (94aa)
SWIB domain-containing protein possibly involved in chromatin remodeling n=2 Tax=unclassified Opitutaceae RepID=I6AXN8_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
WIB/MDM2 domain-containing protein
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_17
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(13265..13714)
-----------------
DNA (450bp)
protein (150aa)
Thioredoxin domain-containing protein n=1 Tax=Cyanobacterium aponinum (strain PCC 10605) RepID=K9Z658_CYAAP
thioredoxin domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
thioredoxin domain-containing protein
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_18
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(13680..14465)
-----------------
DNA (786bp)
protein (262aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_19
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(14554..15135)
-----------------
DNA (582bp)
protein (194aa)
LexA repressor protein; K01356 repressor LexA [EC:3.4.21.88] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
LexA repressor protein id=3046892 bin=GWF2_Melainabacteria_37_15 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
LexA repressor protein
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_20
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(15184..15900)
-----------------
DNA (717bp)
protein (239aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_21
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

15984..16271
-----------------
DNA (288bp)
protein (96aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_22
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

16275..17813
-----------------
DNA (1539bp)
protein (513aa)
Uncharacterized protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U6J5_9CYAN
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_23
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(17803..18789)
-----------------
DNA (987bp)
protein (329aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0002D6B5B0
family 2 glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
family 2 glycosyl transferase
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_24
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

18829..20013
-----------------
DNA (1185bp)
protein (395aa)
1,2-diacylglycerol 3-glucosyltransferase (EC:2.4.1.157) Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
1,2-diacylglycerol 3-glucosyltransferase (EC:2.4.1.157)
Glycosyltransferase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B258_9DELT
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_25
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(20018..20893)
-----------------
DNA (876bp)
protein (292aa)
Uncharacterized protein n=7 Tax=Bacteria RepID=H0P1D9_9SYNC
slr1063; hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
slr1063; hypothetical protein
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_26
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

21263..21556
-----------------
DNA (294bp)
protein (98aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_27
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

21556..23073
-----------------
DNA (1518bp)
protein (506aa)
Uncharacterized protein n=1 Tax=Trichodesmium erythraeum (strain IMS101) RepID=Q111J2_TRIEI
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_400_28
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

23079..23852
-----------------
DNA (774bp)
protein (258aa)
xthA; Exodeoxyribonuclease III; K01142 exodeoxyribonuclease III [EC:3.1.11.2] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
ial:IALB_0513 xthA; Exodeoxyribonuclease III; K01142 exodeoxyribonuclease III [EC:3.1.11.2] id=718032 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
xthA; exodeoxyribonuclease III
Displaying items 1-30 of 105 in total

View Taxonomy