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GWD2_RBX1_39_127_gwd2_scaffold_143

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Displaying items 1-30 of 60 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_143_trna_2
unknown

Not on your lists

comp(132..204)
DNA (73bp)
transferRNA
GWD2_RBX1_39_127_gwd2_scaffold_143_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

378..848
DNA (471bp) protein (157aa)
Tfp pilus assembly protein, major pilin PilA id=1891765 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Tfp pilus assembly protein, major pilin PilA; K02456 general secretion pathway protein G Tax=GWF2_RBX1_38_17_curated
Tfp pilus assembly protein, major pilin PilA
GWD2_RBX1_39_127_gwd2_scaffold_143_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

1040..2758
DNA (1719bp) protein (573aa)
Type IV pilus assembly protein PilM id=1891766 bin=GWE2_RBX1_39_32 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=GWF2_RBX1_38_17_curated
type IV pilus assembly protein PilM
GWD2_RBX1_39_127_gwd2_scaffold_143_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

2779..3393
DNA (615bp) protein (205aa)
id=1891767 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1891767 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_143_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(3390..4544)
DNA (1155bp) protein (385aa)
Chaperone protein DnaJ id=1891768 bin=GWE2_RBX1_39_32 species=Bacillus smithii genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
dnaJ; chaperone protein DnaJ; K03686 molecular chaperone DnaJ Tax=GWF2_RBX1_38_17_curated
dnaJ; molecular chaperone DnaJ
GWD2_RBX1_39_127_gwd2_scaffold_143_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(4627..6534)
DNA (1908bp) protein (636aa)
Chaperone protein DnaK id=1891770 bin=GWE2_RBX1_39_32 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
chaperone protein DnaK; K04043 molecular chaperone DnaK Tax=GWF2_RBX1_38_17_curated
chaperone protein DnaK
GWD2_RBX1_39_127_gwd2_scaffold_143_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(6553..7188)
DNA (636bp) protein (212aa)
Protein GrpE id=1891772 bin=GWE2_RBX1_39_32 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GrpE protein; K03687 molecular chaperone GrpE Tax=GWF2_RBX1_38_17_curated
grpE; molecular chaperone GrpE
GWD2_RBX1_39_127_gwd2_scaffold_143_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(7201..8238)
DNA (1038bp) protein (346aa)
Heat-inducible transcription repressor HrcA id=1891774 bin=GWE2_RBX1_39_32 species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
heat-inducible transcription repressor HrcA; K03705 heat-inducible transcriptional repressor Tax=GWF2_RBX1_38_17_curated
heat-inducible transcription repressor HrcA
GWD2_RBX1_39_127_gwd2_scaffold_143_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

8518..10662
DNA (2145bp) protein (715aa)
CheA signal transduction histidine kinase id=1792088 bin=GWD2_RBX1-related_39_127 species=Thermoanaerobacterium thermosaccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
CheA signal transduction histidine kinase Tax=GWF2_RBX1_38_17_curated
CheA signal transduction histidine kinase
GWD2_RBX1_39_127_gwd2_scaffold_143_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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10697..11077
DNA (381bp) protein (127aa)
Response regulator receiver domain protein id=1891780 bin=GWE2_RBX1_39_32 species=Treponema vincentii genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
cheY; chemotaxis protein CheY Tax=GWF2_RBX1_38_17_curated
chemotaxis protein CheY
GWD2_RBX1_39_127_gwd2_scaffold_143_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

11120..11581
DNA (462bp) protein (154aa)
CheC domain protein id=1891783 bin=GWE2_RBX1_39_32 species=Treponema brennaborense genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
CheC domain-containing protein; K03409 chemotaxis protein CheX Tax=GWF2_RBX1_38_17_curated
CheC domain-containing protein
GWD2_RBX1_39_127_gwd2_scaffold_143_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(11570..13345)
DNA (1776bp) protein (592aa)
Endoglucanase Y id=1891786 bin=GWE2_RBX1_39_32 species=Clostridium sp. Maddingley MBC34-26 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Endoglucanase Y Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_143_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

13698..13982
DNA (285bp) protein (95aa)
Invasion associated locus B family protein id=1891789 bin=GWE2_RBX1_39_32 species=Paracoccus denitrificans genus=Paracoccus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
invasion associated locus B family protein Tax=GWF2_RBX1_38_17_curated
invasion associated locus B family protein
GWD2_RBX1_39_127_gwd2_scaffold_143_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(14557..15144)
DNA (588bp) protein (196aa)
id=1792131 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=24609663 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_143_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(15246..15632)
DNA (387bp) protein (129aa)
Stage II sporulation protein id=1891793 bin=GWE2_RBX1_39_32 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
anti-sigma-factor antagonist; K04749 anti-sigma B factor antagonist Tax=GWF2_RBX1_38_17_curated
anti-sigma-factor antagonist
GWD2_RBX1_39_127_gwd2_scaffold_143_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(15689..18430)
DNA (2742bp) protein (914aa)
GAF domain / stage II sporulation protein E multi-domain protein id=1891852 bin=GWE2_RBX1_39_32 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
serine/threonine phosphatase; K07315 sigma-B regulation protein RsbU (phosphoserine phosphatase) Tax=GWF2_RBX1_38_17_curated
serine/threonine phosphatase containing GAF domains
GWD2_RBX1_39_127_gwd2_scaffold_143_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(18703..18891)
DNA (189bp) protein (63aa)
id=24609660 Tax=GWF2_RBX1_38_17_curated
id=24609660 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
GWD2_RBX1_39_127_gwd2_scaffold_143_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(18878..19219)
DNA (342bp) protein (114aa)
id=1891854 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1891854 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_143_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(19232..19645)
DNA (414bp) protein (138aa)
id=1891855 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1891855 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_143_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

19885..22368
DNA (2484bp) protein (828aa)
Methionine synthase id=1891856 bin=GWE2_RBX1_39_32 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Homocysteine S-methyltransferase/B12 binding domain/Pterin binding enzyme Tax=GWF2_RBX1_38_17_curated
Homocysteine S-methyltransferase/B12 binding domain/Pterin binding enzyme
GWD2_RBX1_39_127_gwd2_scaffold_143_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

22368..23303
DNA (936bp) protein (312aa)
id=1891857 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1891857 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_143_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

23471..24640
DNA (1170bp) protein (390aa)
S-adenosylmethionine synthetase; K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] Tax=GWF2_RBX1_38_17_curated
methionine adenosyltransferase id=1792145 bin=GWD2_RBX1-related_39_127 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
S-adenosylmethionine synthetase
GWD2_RBX1_39_127_gwd2_scaffold_143_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

24695..25186
DNA (492bp) protein (164aa)
UPF0234 protein DesdiDRAFT_3264 id=1891859 bin=GWE2_RBX1_39_32 species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_143_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

25193..26506
DNA (1314bp) protein (438aa)
tRNA modifying protein; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] id=24609653 bin=RAAC11 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
tRNA modifying protein; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] Tax=GWF2_RBX1_38_17_curated
MiaB-like tRNA modifying enzyme YliG
GWD2_RBX1_39_127_gwd2_scaffold_143_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

26503..27024
DNA (522bp) protein (174aa)
cdp-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=GWF2_RBX1_38_17_curated
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase id=1792148 bin=GWD2_RBX1-related_39_127 species=Brevibacillus laterosporus genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_143_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

27014..27553
DNA (540bp) protein (180aa)
Putative competence-damage inducible protein id=1792149 bin=GWD2_RBX1-related_39_127 species=unknown genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
competence/damage-inducible protein CinA-like protein Tax=GWF2_RBX1_38_17_curated
competence/damage-inducible protein CinA-like protein
GWD2_RBX1_39_127_gwd2_scaffold_143_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists


27613..28653
DNA (1041bp) protein (347aa)
Protein RecA id=1792150 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
RecA protein; K03553 recombination protein RecA Tax=GWF2_RBX1_38_17_curated
recA; protein RecA
GWD2_RBX1_39_127_gwd2_scaffold_143_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

28730..30271
DNA (1542bp) protein (514aa)
Ribonuclease Y id=1792151 bin=GWD2_RBX1-related_39_127 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
2,3 cyclic-nucleotide 2-phosphodiesterase; K06950 uncharacterized protein Tax=GWF2_RBX1_38_17_curated
2,3 cyclic-nucleotide 2-phosphodiesterase
GWD2_RBX1_39_127_gwd2_scaffold_143_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

30362..31159
DNA (798bp) protein (266aa)
Uncharacterized protein id=1891865 bin=GWE2_RBX1_39_32 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hydrolase Tax=GWF2_RBX1_38_17_curated
Conserved hypothetical protein CHP00282
GWD2_RBX1_39_127_gwd2_scaffold_143_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

31593..32132
DNA (540bp) protein (180aa)
Cache type 2 domain-containing protein id=1891866 bin=GWE2_RBX1_39_32 species=Sulfurovum sp. AR genus=Sulfurovum taxon_order=unknown taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein Tax=GWF2_RBX1_38_17_curated
methyl-accepting chemotaxis sensory transducer
Displaying items 1-30 of 60 in total

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