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RBG_13_Bacteroidetes_42_15_RBG_13_scaffold_2413

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_Bacteroidetes_42_15_RBG_13_scaffold_2413_1
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..798)
DNA (798bp) protein (266aa)
Peptidase S8/S53 n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SU14_9BACT
peptidase S08 family protein Tax=RBG_13_Bacteroidetes_42_15_curated
peptidase S08 family protein
RBG_13_Bacteroidetes_42_15_RBG_13_scaffold_2413_2
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(848..1564)
DNA (717bp) protein (239aa)
xerD; integrase/recombinase XerD; K04763 integrase/recombinase XerD Tax=RBG_13_Bacteroidetes_42_15_curated
tyrosine recombinase XerD; K04763 integrase/recombinase XerD id=7201482 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
integrase
RBG_13_Bacteroidetes_42_15_RBG_13_scaffold_2413_3
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2175..2858)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-O11 RepID=UPI000365F85A
hypothetical protein Tax=RBG_13_Bacteroidetes_42_15_curated
hypothetical protein
RBG_13_Bacteroidetes_42_15_RBG_13_scaffold_2413_4
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2860..3303)
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XXT7_9BACT
hypothetical protein Tax=RBG_13_Bacteroidetes_42_15_curated
hypothetical protein
RBG_13_Bacteroidetes_42_15_RBG_13_scaffold_2413_5
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3353..3934)
DNA (582bp) protein (194aa)
Phosphatidate cytidylyltransferase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MPH0_9BACT
phosphatidate cytidylyltransferase Tax=RBG_13_Bacteroidetes_42_15_curated
phosphatidate cytidylyltransferase
RBG_13_Bacteroidetes_42_15_RBG_13_scaffold_2413_6
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3931..4617)
DNA (687bp) protein (229aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=RBG_13_Bacteroidetes_42_15_curated
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CKW8_DESK7
RBG_13_Bacteroidetes_42_15_RBG_13_scaffold_2413_7
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4602..5372)
DNA (771bp) protein (257aa)
Protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RBG_13_Bacteroidetes_42_15_curated
PASTA domain containing protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XWY3_9BACT
protein kinase
RBG_13_Bacteroidetes_42_15_RBG_13_scaffold_2413_8
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6630..6959)
DNA (330bp) protein (110aa)
Preprotein translocase, YajC subunit n=1 Tax=Caldithrix abyssi DSM 13497 PF4_9BACT">RepID=H1XPF4_9BACT
preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC Tax=RBG_13_Bacteroidetes_42_15_curated
preprotein translocase subunit YajC
RBG_13_Bacteroidetes_42_15_RBG_13_scaffold_2413_9
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6985..8103)
DNA (1119bp) protein (373aa)
tgt-2; queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] id=7200427 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
tRNA-guanine transglycosylase Tax=RBG_13_Bacteroidetes_42_15_curated
tRNA-guanine transglycosylase
RBG_13_Bacteroidetes_42_15_RBG_13_scaffold_2413_10
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8115..9470)
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Caldibacillus debilis RepID=UPI00036C487D
radA; DNA repair protein Tax=RBG_13_Bacteroidetes_42_15_curated
DNA repair protein RadA
RBG_13_Bacteroidetes_42_15_RBG_13_scaffold_2413_11
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9467..10198)
DNA (732bp) protein (244aa)
Ribonucleotide ABC transporter ATP-binding protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MQN0_9BACT
ABC transporter ATP-binding protein; K02065 putative ABC transport system ATP-binding protein Tax=RBG_13_Bacteroidetes_42_15_curated
ABC transporter ATP-binding protein
RBG_13_Bacteroidetes_42_15_RBG_13_scaffold_2413_12
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10203..10988)
DNA (786bp) protein (262aa)
Putative ABC transport system permease protein; K02066 putative ABC transport system permease protein Tax=RBG_13_Bacteroidetes_42_15_curated
Putative ABC transport system permease protein id=3660345 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
ABC transport system permease protein
RBG_13_Bacteroidetes_42_15_RBG_13_scaffold_2413_13
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10985..11569)
DNA (585bp) protein (195aa)
nicotinate-nucleotide adenylyltransferase (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] Tax=RBG_13_Bacteroidetes_42_15_curated
nicotinate-nucleotide adenylyltransferase (EC:2.7.7.18)
nicotinamide-nucleotide adenylyltransferase n=1 Tax=Marinimicrobia bacterium SCGC AAA298-D23 RepID=UPI00039DBD56
RBG_13_Bacteroidetes_42_15_RBG_13_scaffold_2413_14
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11594..12412)
DNA (819bp) protein (273aa)
Outer membrane assembly lipoprotein YfiO n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XX24_9BACT
outer membrane assembly lipoprotein YfiO Tax=RBG_13_Bacteroidetes_42_15_curated
outer membrane assembly lipoprotein YfiO
RBG_13_Bacteroidetes_42_15_RBG_13_scaffold_2413_15
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12409..12915)
DNA (507bp) protein (169aa)
Tax=RBG_13_Bacteroidetes_42_15_curated
RBG_13_Bacteroidetes_42_15_RBG_13_scaffold_2413_16
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13681..13848)
DNA (168bp) protein (56aa)
Tax=RBG_13_Bacteroidetes_42_15_curated
RBG_13_Bacteroidetes_42_15_RBG_13_scaffold_2413_17
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14161..15687)
DNA (1527bp) protein (509aa)
lnt; apolipoprotein N-acyltransferase (EC:2.3.1.-); K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] Tax=RBG_13_Bacteroidetes_42_15_curated
lnt; apolipoprotein N-acyltransferase (EC:2.3.1.-)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MI57_9BACT
RBG_13_Bacteroidetes_42_15_RBG_13_scaffold_2413_18
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15684..16130)
DNA (447bp) protein (149aa)
Putative Holliday junction resolvase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0L569_9BACT
conserved hypothetical protein TIGR00250 Tax=RBG_13_Bacteroidetes_42_15_curated
conserved hypothetical protein TIGR00250
RBG_13_Bacteroidetes_42_15_RBG_13_scaffold_2413_19
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16136..16453)
DNA (318bp) protein (106aa)
Histone family protein DNA-binding protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XXP4_9BACT
histone family protein DNA-binding protein; K05788 integration host factor subunit beta Tax=RBG_13_Bacteroidetes_42_15_curated
histone family protein DNA-binding protein
RBG_13_Bacteroidetes_42_15_RBG_13_scaffold_2413_20
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16489..18771)
DNA (2283bp) protein (761aa)
SpoT; guanosine polyphosphate pyrophosphohydrolase/synthetase; K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=RBG_13_Bacteroidetes_42_15_curated
MFS transporter n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003A15D0F
RelA/SpoT family protein
RBG_13_Bacteroidetes_42_15_RBG_13_scaffold_2413_21
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20159..20473)
DNA (315bp) protein (105aa)
Bacteriophage-type DNA polymerase; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] Tax=RBG_13_Bacteroidetes_42_15_curated
ial:IALB_0710 Bacteriophage-type DNA polymerase; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] id=718472 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Bacteriophage-type DNA polymerase
Displaying 21 items

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