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RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_1
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

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264..746
-----------------
DNA (483bp)
protein (161aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_2
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(901..1044)
-----------------
DNA (144bp)
protein (48aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_3
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(1149..2360)
-----------------
DNA (1212bp)
protein (404aa)
putative DEAD/DEAH box helicase domain protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
ATP-dependent RNA helicase RhlE id=2761196 bin=GWC1_CPR2_39_9 species=Bacillus pseudofirmus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
ATP-dependent RNA helicase RhlE
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_4
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

2636..2959
-----------------
DNA (324bp)
protein (108aa)
Uncharacterized protein n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZEP3_NODSP
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_5
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

2961..3701
-----------------
DNA (741bp)
protein (247aa)
putative phosphoesterase (EC:3.1.3.-) Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
putative phosphoesterase (EC:3.1.3.-)
Putative Phosphoesterase, PAP2 superfamily n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7K6_9BACT
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_6
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(3698..5275)
-----------------
DNA (1578bp)
protein (526aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DYC6_9BACT
dolichyl-phosphate-mannose-protein mannosyltransferase family protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
dolichyl-phosphate-mannose-protein mannosyltransferase family protein
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_7
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(5262..8243)
-----------------
DNA (2982bp)
protein (994aa)
putA; 1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12); K13821 proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.99.8 1.5.1.12] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria
1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4086
1-pyrroline-5 carboxylate dehydrogenase
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_8
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

8316..9278
-----------------
DNA (963bp)
protein (321aa)
aldo/keto reductase Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
sfh:SFHH103_01907 aldo/keto reductase id=719824 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
aldo/keto reductase
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_9
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(9259..9513)
-----------------
DNA (255bp)
protein (85aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_10
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(9556..10509)
-----------------
DNA (954bp)
protein (318aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_11
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(10578..11846)
-----------------
DNA (1269bp)
protein (423aa)
dihydrolipoyl dehydrogenase (EC:1.3.98.1)
Dihydropyrimidine dehydrogenase [NADP+] n=1 Tax=uncultured bacterium A1Q1_fos_18 RepID=L7VVQ1_9BACT
dihydropyrimidine dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_12
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(11839..13149)
-----------------
DNA (1311bp)
protein (437aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00266 glutamate synthase (NADPH/NADH) small chain [EC:1.4.1.13 1.4.1.14] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=4296756 bin=GWC2_Ignavibacteria_38_9 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_13
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(13153..14478)
-----------------
DNA (1326bp)
protein (442aa)
aminotransferase class-III (EC:2.6.1.44); K00827 alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase [EC:2.6.1.44 2.6.1.40] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_3
aminotransferase class-III (EC:2.6.1.44)
Putative aminotransferase class-III n=2 Tax=Legionella longbeachae RepID=D3HJI1_LEGLN
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_14
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(14495..15364)
-----------------
DNA (870bp)
protein (290aa)
Beta-ureidopropionase; K12251 N-carbamoylputrescine amidase [EC:3.5.1.53] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A407_9BACT
Beta-ureidopropionase
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_15
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(15361..16785)
-----------------
DNA (1425bp)
protein (475aa)
dihydropyrimidinase; K01464 dihydropyrimidinase [EC:3.5.2.2] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
Dihydropyrimidinase id=4115894 bin=GWF2_Bacteroidetes_41_31 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
phenylhydantoinase
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_16
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(16779..18308)
-----------------
DNA (1530bp)
protein (510aa)
methylmalonate-semialdehyde dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
methylmalonate-semialdehyde dehydrogenase id=24563983 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
methylmalonate-semialdehyde dehydrogenase
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_17
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

18675..19448
-----------------
DNA (774bp)
protein (258aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_18
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

19602..20225
-----------------
DNA (624bp)
protein (208aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_19
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

20459..20773
-----------------
DNA (315bp)
protein (105aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RNA-binding region RNP-1 id=4402623 bin=GWF2_Lentisphaerae_57_35 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_20
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(20770..21867)
-----------------
DNA (1098bp)
protein (366aa)
Uncharacterized protein n=1 Tax=Glaciecola pallidula DSM 14239 = ACAM 615 RepID=K6Y8U0_9ALTE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_21
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(21962..22465)
-----------------
DNA (504bp)
protein (168aa)
Uncharacterized protein n=1 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IBA4_PHYMF
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_22
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(22497..23480)
-----------------
DNA (984bp)
protein (328aa)
Mammalian cell entry related domain protein n=1 Tax=Marinomonas sp. (strain MWYL1) RepID=A6VY04_MARMS
hypothetical protein; K02067 putative ABC transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_23
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(23507..24220)
-----------------
DNA (714bp)
protein (238aa)
ABC transporter related n=1 Tax=Clostridium sp. CAG:729 RepID=R7LPE4_9CLOT
sll1001; ABC transporter; K02065 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
ABC transporter
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_24
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(24346..25149)
-----------------
DNA (804bp)
protein (268aa)
ABC transporter permease n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034791D7
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_25
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(25385..26677)
-----------------
DNA (1293bp)
protein (431aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_26
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(26832..27899)
-----------------
DNA (1068bp)
protein (356aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_27
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(28131..28559)
-----------------
DNA (429bp)
protein (143aa)
S-adenosylmethionine decarboxylase proenzyme; K01611 S-adenosylmethionine decarboxylase [EC:4.1.1.50] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Sulfurihydrogenibium sp. (strain YO3AOP1) RepID=B2V954_SULSY
S-adenosylmethionine decarboxylase proenzyme
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_28
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists


28959..31403
-----------------
DNA (2445bp)
protein (815aa)
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20); K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
sat:SYN_01723 phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20); K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] id=20238 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_29
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

31376..32977
-----------------
DNA (1602bp)
protein (534aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_419_30
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

32974..34065
-----------------
DNA (1092bp)
protein (364aa)
twitching motility protein; K02669 twitching motility protein PilT Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
tel:tll0121 pilT; twitching motility protein; K02669 twitching motility protein PilT id=18880 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
twitching motility protein
Displaying items 1-30 of 68 in total

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