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RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_23862

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_23862_1
R_Nitrospinae_39_10, Nitrospinae, Bacteria

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comp(125..478)
-----------------
DNA (354bp)
protein (118aa)
hypothetical protein n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B3E35F
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_23862_2
R_Nitrospinae_39_10, Nitrospinae, Bacteria

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comp(475..789)
-----------------
DNA (315bp)
protein (105aa)
Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_23862_3
R_Nitrospinae_39_10, Nitrospinae, Bacteria

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comp(831..2360)
-----------------
DNA (1530bp)
protein (510aa)
Mg chelatase subunit ChlI; K07391 magnesium chelatase family protein Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
Mg chelatase-related chaperone ATPase; K07391 magnesium chelatase family protein id=14425921 bin=bin1_lowGC species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
transcriptional regulator
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_23862_4
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(2422..2847)
-----------------
DNA (426bp)
protein (142aa)
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase; K01520 dUTP pyrophosphatase [EC:3.6.1.23] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA255-E10 RepID=UPI0003785527
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_23862_5
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(2819..3382)
-----------------
DNA (564bp)
protein (188aa)
Membrane-associated phospholipid phosphatase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Putative uncharacterized protein id=3930456 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Membrane-associated phospholipid phosphatase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_23862_6
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(3384..4448)
-----------------
DNA (1065bp)
protein (355aa)
ADP-heptose--LPS heptosyltransferase II (EC:2.-.-.-) Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
ADP-heptose--LPS heptosyltransferase II (EC:2.-.-.-)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YH79_9DELT
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_23862_7
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(4459..5331)
-----------------
DNA (873bp)
protein (291aa)
Lipid A biosynthesis acyltransferase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Lipid A biosynthesis acyltransferase id=2284574 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
Lipid A biosynthesis acyltransferase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_23862_8
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

5468..5758
-----------------
DNA (291bp)
protein (97aa)
10 kDa chaperonin n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GBP9_SORC5
groES; co-chaperonin GroES; K04078 chaperonin GroES Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
groES; co-chaperonin GroES
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_23862_9
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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5805..7430
-----------------
DNA (1626bp)
protein (542aa)
60 kDa chaperonin n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJE3_9BACT
groL; 60 kDa chaperonin (Protein Cpn60) (groEL protein) Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
groL; 60 kDa chaperonin (Protein Cpn60) (groEL protein)
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_23862_10
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(7551..7802)
-----------------
DNA (252bp)
protein (84aa)
PilT protein domain-containing protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
PIN domain-containing protein id=4549763 bin=GWC2_Deltaproteobacteria_42_51 species=Calothrix parietina genus=Calothrix taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
PilT protein domain-containing protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_23862_11
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(7857..8045)
-----------------
DNA (189bp)
protein (63aa)
Uncharacterized protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Uncharacterized protein id=1992281 bin=GWE2_Spirochaete_31_10 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_Spirochaete_31_10 organism_group=Spirochaetes organism_desc=Good +
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_23862_12
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(8038..8301)
-----------------
DNA (264bp)
protein (88aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IKE0_9PLAN
Uncharacterized protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_23862_13
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(8817..9404)
-----------------
DNA (588bp)
protein (196aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z979_9BACT
transcriptional regulator Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
transcriptional regulator
Displaying 13 items

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