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RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_13696

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_13696_1
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(2..1396)
-----------------
DNA (1395bp)
protein (465aa)
tRNA modification GTPase MnmE n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0KB21_HALHC
tRNA modification GTPase TrmE Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
tRNA modification GTPase TrmE
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_13696_2
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(1426..2073)
-----------------
DNA (648bp)
protein (216aa)
Putative RNA-binding protein n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4AEX4_DESDJ
RNA-binding protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RNA-binding protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_13696_3
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(2084..3673)
-----------------
DNA (1590bp)
protein (530aa)
hypothetical protein n=1 Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI00036CD6A1
inner membrane protein OxaA; K03217 preprotein translocase subunit YidC Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
inner membrane protein OxaA
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_13696_4
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(3744..4097)
-----------------
DNA (354bp)
protein (118aa)
ribonuclease P protein component; K03536 ribonuclease P protein component [EC:3.1.26.5] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
ribonuclease P n=1 Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B475E0
ribonuclease P protein component
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_13696_5
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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4446..5147
-----------------
DNA (702bp)
protein (234aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51); K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YKJ5_9BACT
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_13696_6
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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5171..6688
-----------------
DNA (1518bp)
protein (506aa)
Metal dependent phosphohydrolase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FM89_DESAA
metal dependent phosphohydrolase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
metal dependent phosphohydrolase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_13696_7
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(6752..7495)
-----------------
DNA (744bp)
protein (248aa)
Putative gamma-glutamyl-gamma-aminobutyrate hydrolase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A8C1_9PROT
peptidase C26; K07010 putative glutamine amidotransferase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
glutamine amidotransferase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_13696_8
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(7557..8354)
-----------------
DNA (798bp)
protein (266aa)
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=TRPA_GEOUR
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_13696_9
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(8341..9048)
-----------------
DNA (708bp)
protein (236aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IN97_9PLAN
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_13696_10
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(9148..10104)
-----------------
DNA (957bp)
protein (319aa)
cobD; cobalamin biosynthesis protein cobD (EC:6.3.1.10); K02227 adenosylcobinamide-phosphate synthase [EC:6.3.1.10] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Cobalamin biosynthesis protein CobD id=4657168 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
cobalamin biosynthesis protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_13696_11
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(10151..11635)
-----------------
DNA (1485bp)
protein (495aa)
cobyric acid synthase CobQ; K02232 adenosylcobyric acid synthase [EC:6.3.5.10] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Cobyric acid synthase id=2880982 bin=GWF2_OP3_43_52 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
cobyric acid synthase CobQ
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_13696_12
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(11804..12901)
-----------------
DNA (1098bp)
protein (366aa)
L-threonine-O-3-phosphate decarboxylase; K04720 threonine-phosphate decarboxylase [EC:4.1.1.81] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
L-threonine-O-3-phosphate decarboxylase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QVX3_ACEAZ
L-threonine-O-3-phosphate decarboxylase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_13696_13
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(12988..14064)
-----------------
DNA (1077bp)
protein (359aa)
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21); K00768 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] Tax=RifCSPlowO2_12_Nit
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase id=1742952 bin=GWD2_Nitrospirae-related_57_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_13696_14
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(14098..14862)
-----------------
DNA (765bp)
protein (255aa)
cobalamin 5'-phosphate synthase; K02233 adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00036AB078
cobalamin 5'-phosphate synthase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_13696_15
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(14922..15485)
-----------------
DNA (564bp)
protein (188aa)
adenosylcobinamide-phosphate guanylyltransferase; K02231 adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curat
Adenosylcobinamide-phosphate guanylyltransferase id=3246227 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Kosmotoga olearia genus=Kosmotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
adenosylcobinamide-phosphate guanylyltransferase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_13696_16
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(15470..16840)
-----------------
DNA (1371bp)
protein (457aa)
cobyrinic acid a,c-diamide synthase; K02224 cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Cobyrinic acid A,C-diamide synthase id=1872119 bin=GWB2_Proteobacteria_55_19 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
cobyrinic acid a,c-diamide synthase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_13696_17
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(16824..17474)
-----------------
DNA (651bp)
protein (217aa)
precorrin-3B C17-methyltransferase (EC:2.1.1.131); K05934 precorrin-3B C17-methyltransferase [EC:2.1.1.131] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
precorrin-3B C17-methyltransferase (EC:2.1.1.131)
Precorrin-3B C17-methyltransferase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CHV0_DESK7
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_13696_18
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(17549..18292)
-----------------
DNA (744bp)
protein (248aa)
cbiG; cobalamin biosynthesis protein CbiG; K02189 cobalt-precorrin 5A hydrolase [EC:3.7.1.12] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Cobalamin biosynthesis protein n=1 Tax=planctomycete KSU-1 RepID=I3IGK4_9PLAN
cbiG; cobalamin biosynthesis protein CbiG
Displaying 18 items

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