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RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_9776

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_9776_1
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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3..437
-----------------
DNA (435bp)
protein (145aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002ED2383
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_9776_2
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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465..1304
-----------------
DNA (840bp)
protein (280aa)
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Putative uncharacterized protein id=3437536 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_9776_3
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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1301..2278
-----------------
DNA (978bp)
protein (326aa)
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
ABC transporter related protein id=1947265 bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
ABC transporter
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_9776_4
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(2455..3267)
-----------------
DNA (813bp)
protein (271aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YWB9_9BACT
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_9776_5
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(3329..5071)
-----------------
DNA (1743bp)
protein (581aa)
phosphoglucosamine mutase (EC:5.4.2.10); K03431 phosphoglucosamine mutase [EC:5.4.2.10] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
phosphoglucosamine mutase (EC:5.4.2.10)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI00037CBA43
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_9776_6
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(5125..6639)
-----------------
DNA (1515bp)
protein (505aa)
FAD dependent oxidoreductase; K09835 prolycopene isomerase [EC:5.2.1.13] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
FAD dependent oxidoreductase n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QZ32_CHLT3
FAD dependent oxidoreductase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_9776_7
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(6647..7990)
-----------------
DNA (1344bp)
protein (448aa)
acetyl-CoA carboxylase, biotin carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
acetyl-CoA carboxylase (EC:6.4.1.2)
Acetyl-CoA carboxylase, biotin carboxylase component id=4661310 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_9776_8
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(8010..8492)
-----------------
DNA (483bp)
protein (161aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XV16_9BACT
biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
biotin carboxyl carrier protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_9776_9
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(8508..9068)
-----------------
DNA (561bp)
protein (187aa)
Elongation factor P n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LVG9_TEPAE
efp; elongation factor P Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
efp; elongation factor P
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_9776_10
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(9077..9739)
-----------------
DNA (663bp)
protein (221aa)
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Peptidase M24 n=2 Tax=Desulfotomaculum RepID=F6BA00_DESCC
peptidase M24
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_9776_11
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(10160..10603)
-----------------
DNA (444bp)
protein (148aa)
aroQ; 3-dehydroquinate dehydratase (EC:4.2.1.10); K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
aroQ; 3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase id=4387126 bin=GWA2_OP3_53_43 species=Gloeocapsa sp. PCC 7428 genus=Gloeocapsa taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_9776_12
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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10749..11297
-----------------
DNA (549bp)
protein (183aa)
metal dependent phosphohydrolase; K03152 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Metal dependent phosphohydrolase id=2948272 bin=GWC2_Deltaproteobacteria_42_51 species=Sulfurihydrogenibium azorense genus=Sulfurihydrogenibium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
metal dependent phosphohydrolase
Displaying 12 items

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