ggKbase home page

RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_23415_4

Organism: Nitrospinae bacterium RIFCSPLOWO2_12_FULL_39_93

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: comp(2243..2920)

Top 3 Functional Annotations

Value Algorithm Source
thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 225.0
  • Bit_score: 443
  • Evalue 2.30e-121
Thymidylate kinase id=4078404 bin=GWC2_Nitrospirae-rel_56_14 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 214.0
  • Bit_score: 205
  • Evalue 4.50e-50
tmk-1; thymidylate kinase similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 216.0
  • Bit_score: 195
  • Evalue 1.70e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Nitrospinae_39_15 → Nitrospinae → Bacteria

Sequences

DNA sequence
Length: 678
ATGCCAAAATTTATTACCTTTGAAGGGATTGAGGGATGTGGAAAGACAACACAATTAAAATTGCTTGCAAACCACCTTCGTGAGAAAGGCTATTCTGTATACGAGACAAGGGAGCCGGGTGGAACATTAATCGGAGACCAGATAAGAAAGATACTCCTTAATCCTGAAAATAAAAATATATGTAGCATTGCAGAGTTATTTTTATATGAGGCATGCAGGGCGCAACTGATAAAAGAGTTAAGAGTCGGGAGTCGGGAGTCGGGAGTCAGAGGAAATGATAAGGAGTTTATTCTGTGTGACCGTTTCATTGATTCCACCATCGCTTATCAGGGATATGGGAGGGGGATTGATACAGAAATCATAGAAGGATTAAACATGATAGCCTCAAATGATATAAAACCTGATATCACAATACTCCTTGACATGGATGTAAAGACAGGATTGGCGAGGGCAAGGGGCAGAAATATAAATGTCAATGTCCTACAAAGCAACCTTTCAGAGAGCAGGTTTGAAGAAGAGACATTGGATTTCCATGAAAAGGTCAGGGAAGGCTTTCTCAAAATTGCATCGGAGGAGCCTGATAGAGTGAAGGTAGTGGATGCAACTAAGGGAATAGAAAAAATACAAAAAGAAATAATTAGAATAGTGGAGATGGAACAAAAGAAAATTGCGGTGTAA
PROTEIN sequence
Length: 226
MPKFITFEGIEGCGKTTQLKLLANHLREKGYSVYETREPGGTLIGDQIRKILLNPENKNICSIAELFLYEACRAQLIKELRVGSRESGVRGNDKEFILCDRFIDSTIAYQGYGRGIDTEIIEGLNMIASNDIKPDITILLDMDVKTGLARARGRNINVNVLQSNLSESRFEEETLDFHEKVREGFLKIASEEPDRVKVVDATKGIEKIQKEIIRIVEMEQKKIAV*