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RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_23415

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_23415_1
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(2..259)
-----------------
DNA (258bp)
protein (86aa)
Ribosome-binding ATPase YchF n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B1D6_HERA2
ychF; GTP-dependent nucleic acid-binding protein EngD; K06942 Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
GTP-dependent nucleic acid-binding protein EngD
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_23415_2
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(256..1080)
-----------------
DNA (825bp)
protein (275aa)
PSP1 domain protein n=2 Tax=Clostridium botulinum RepID=C5VNC4_CLOBO
PSP1 domain-containing protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
PSP1 domain-containing protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_23415_3
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(1064..2143)
-----------------
DNA (1080bp)
protein (360aa)
DNA polymerase III subunit delta' (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
DNA polymerase III subunit delta' (EC:2.7.7.7)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI00037AB4C8
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_23415_4
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(2243..2920)
-----------------
DNA (678bp)
protein (226aa)
thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Thymidylate kinase id=4078404 bin=GWC2_Nitrospirae-rel_56_14 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
tmk-1; thymidylate kinase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_23415_5
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(2955..3446)
-----------------
DNA (492bp)
protein (164aa)
molybdopterin biosynthesis mog protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Hypothetical cytosolic protein id=3637629 bin=GWC2_Deltaproteobacteria_42_51 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
molybdopterin biosynthesis mog protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_23415_6
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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3606..4385
-----------------
DNA (780bp)
protein (260aa)
signal-transduction protein with CBS domain Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
cytochrome b/b6-like protein; K00412 ubiquinol-cytochrome c reductase cytochrome b subunit id=14622919 bin=bin5_DeltaP species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
signal-transduction protein with CBS domain
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_23415_7
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

4382..5635
-----------------
DNA (1254bp)
protein (418aa)
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein id=14622918 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_23415_8
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(5707..6231)
-----------------
DNA (525bp)
protein (175aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.13); K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
mannose-1-phosphate guanylyltransferase (EC:2.7.7.13)
Mannose-1-phosphate guanylyltransferase (GDP) n=1 Tax=Smithella sp. ME-1 RepID=V4FBK4_9DELT
Displaying 8 items

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