ggKbase home page

RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_20028_1

Organism: Nitrospinae bacterium RIFCSPLOWO2_12_FULL_39_93

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: comp(3..473)

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein; K03630 DNA repair protein RadC Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 157.0
  • Bit_score: 303
  • Evalue 1.50e-79
DNA repair protein id=2726263 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 157.0
  • Bit_score: 158
  • Evalue 7.50e-36
DNA repair protein similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 152.0
  • Bit_score: 152
  • Evalue 1.20e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Nitrospinae_39_15 → Nitrospinae → Bacteria

Sequences

DNA sequence
Length: 471
ATGGCTGAATATAAGGAAGCAATTAAAGATTGGCCTGAGAATGAGAGACCGAGGGAAAGACTCATCAAATATGGTGCTGAATCCCTATCCGATGCCCAGCTCCTTGCCATAATATTGAGGACAGGTAATAAAACAAGAAGTGCTGTTGATTTAGGAAGAACATTGATAAGTAAATTTGAAGATTTCCGTTCTATGGATTCTCTCAGCATTTCTGAGCTATGCAAAGAGAAAGGTATTGGCAATGCAAAGGCTGCACAGATAAAGGCTGCCTTTGAGATAGGAAAAAGGATGCTTTCTGGTGGAAGCGGGTTAAAGAAAGTTTTTAGAAGCAGTGATGATGTTGTAAATTATTATATCCCTTTAATGAAGAACATGAAGAAGGAGGTTTTTAAGACTATCCTTCTGGATAGTAAAAATAAAATCTTAAAAGAAAATGTAACAGTTTCTGAAGGCTCGCTTACTGCCTCAATT
PROTEIN sequence
Length: 157
MAEYKEAIKDWPENERPRERLIKYGAESLSDAQLLAIILRTGNKTRSAVDLGRTLISKFEDFRSMDSLSISELCKEKGIGNAKAAQIKAAFEIGKRMLSGGSGLKKVFRSSDDVVNYYIPLMKNMKKEVFKTILLDSKNKILKENVTVSEGSLTASI