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RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_460

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_460_1
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(182..1354)
-----------------
DNA (1173bp)
protein (391aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z8K8_9BACT
ATPase AAA; K07133 Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
ATPase AAA
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_460_2
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(1506..1862)
-----------------
DNA (357bp)
protein (119aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZUI8_BIFLJ
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Zn-dependent protease
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_460_3
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(2063..2566)
-----------------
DNA (504bp)
protein (168aa)
fimbrial protein; K02650 type IV pilus assembly protein PilA Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Putative uncharacterized protein id=4985999 bin=GWA2_Elusimicrobia_56_46 species=Ilyobacter polytropus genus=Ilyobacter taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
general secretion pathway protein G
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_460_4
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(2582..3226)
-----------------
DNA (645bp)
protein (215aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q480H2_COLP3
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
hypothetical protein
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_460_5
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(3367..3816)
-----------------
DNA (450bp)
protein (150aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_460_6
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

3906..5006
-----------------
DNA (1101bp)
protein (367aa)
ABC transporter related protein n=1 Tax=Halanaerobium hydrogeniformans RepID=E4RJH8_HALHG
ABC transporter; K10112 maltose/maltodextrin transport system ATP-binding protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
ABC transporter
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_460_7
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

5080..5664
-----------------
DNA (585bp)
protein (195aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MSA1_9BACT
RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
RNA polymerase, sigma-24 subunit, ECF subfamily
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_460_8
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

5707..6312
-----------------
DNA (606bp)
protein (202aa)
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Putative Glycosyl hydrolase, family 13 id=3512835 bin=GWC2_Nitrospirae_57_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_460_9
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

6336..6923
-----------------
DNA (588bp)
protein (196aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_460_10
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

6920..8047
-----------------
DNA (1128bp)
protein (376aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_460_11
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(8024..8959)
-----------------
DNA (936bp)
protein (312aa)
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Uncharacterized protein id=4498451 bin=GWC2_Elusimicrobia_51_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
hypothetical protein
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_460_12
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(8956..12618)
-----------------
DNA (3663bp)
protein (1221aa)
carbohydrate binding family 6 Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Uncharacterized protein id=3116087 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
carbohydrate binding family 6
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_460_13
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(12728..13357)
-----------------
DNA (630bp)
protein (210aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_460_14
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

13579..14511
-----------------
DNA (933bp)
protein (311aa)
ABC transporter; K09687 antibiotic transport system ATP-binding protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
ABC transporter related protein id=4633837 bin=GWC2_Ignavibacteria_56_12 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
ABC transporter
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_460_15
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

14649..15353
-----------------
DNA (705bp)
protein (235aa)
ABC transporter Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
ABC-type transport system, membrane protein; K01992 ABC-2 type transport system permease protein id=5094634 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
ABC transporter
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_460_16
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

15659..17224
-----------------
DNA (1566bp)
protein (522aa)
ABC transporter Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Putative uncharacterized protein id=4796260 bin=GWA2_Ignavibacteria_55_11 species=Salinibacter ruber genus=Salinibacter taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
ABC transporter
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_460_17
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

17217..18146
-----------------
DNA (930bp)
protein (310aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_460_18
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(19099..21255)
-----------------
DNA (2157bp)
protein (719aa)
NHL repeat containing protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LH88_9BACT
fibronectin, type III Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
fibronectin, type III
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_460_19
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(21407..21832)
-----------------
DNA (426bp)
protein (142aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_460_20
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(22001..22153)
-----------------
DNA (153bp)
protein (51aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_460_21
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

22344..22895
-----------------
DNA (552bp)
protein (184aa)
MerR family transcriptional regulator Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Transcriptional regulator id=3950202 bin=GWF2_OP3_38_59 species=unknown genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
MerR family transcriptional regulator
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_460_22
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

22964..24160
-----------------
DNA (1197bp)
protein (399aa)
peptidase Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
M20/DapE family protein YgeY id=3692786 bin=GWF2_Lentisphaerae_57_35 species=Kosmotoga olearia genus=Kosmotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
peptidase
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_460_23
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

24150..25373
-----------------
DNA (1224bp)
protein (408aa)
ackA; acetate kinase (EC:2.7.2.1); K00925 acetate kinase [EC:2.7.2.1] Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
ackA; acetate kinase (EC:2.7.2.1)
Acetate kinase id=3395037 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_460_24
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

25345..26433
-----------------
DNA (1089bp)
protein (363aa)
ackA; acetate kinase; K00925 acetate kinase [EC:2.7.2.1] Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Acetate kinase n=1 Tax=Candidatus Arthromitus sp. SFB-rat-Yit RepID=G2IH05_9CLOT
ackA; acetate kinase
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_460_25
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(26430..28769)
-----------------
DNA (2340bp)
protein (780aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29639_ARCFU
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
4-amino-4-deoxy-L-arabinose transferase
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_460_26
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

28894..30165
-----------------
DNA (1272bp)
protein (424aa)
D-galacturonic acid reductase Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Oxidoreductase domain-containing protein id=1968490 bin=GWA2_Bacteroidetes_42_15 species=Clostridium bolteae genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
oxidoreductase domain-containing protein
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_460_27
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

30484..30963
-----------------
DNA (480bp)
protein (160aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_460_28
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(30995..32596)
-----------------
DNA (1602bp)
protein (534aa)
cshA; DEAD-box ATP-dependent RNA helicase CshA (EC:3.6.4.13) Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
DEAD/DEAH box helicase domain-containing protein
RNA helicase id=4917716 bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
Displaying 28 items

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