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RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_989

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_989_1
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

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486..1463
-----------------
DNA (978bp)
protein (326aa)
Uncharacterized protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Uncharacterized protein id=4800382 bin=GWA2_Elusimicrobia_51_34 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_989_2
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

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comp(2037..2234)
-----------------
DNA (198bp)
protein (66aa)
Cold shock protein n=3 Tax=Jonquetella RepID=H0UKS6_9BACT
protein CspLB; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
cold-shock protein
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_989_3
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

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comp(2523..3434)
-----------------
DNA (912bp)
protein (304aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_989_4
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

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comp(3523..5379)
-----------------
DNA (1857bp)
protein (619aa)
uup; ABC transporter ATP-binding protein; K06158 ATP-binding cassette, subfamily F, member 3 Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
ABC transporter, ATP-binding protein id=3679472 bin=GWB1_CP_36_13 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
uup; ABC transporter ATP-binding protein
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_989_5
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

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5522..6529
-----------------
DNA (1008bp)
protein (336aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_989_6
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

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6529..6930
-----------------
DNA (402bp)
protein (134aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_989_7
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

6943..7983
-----------------
DNA (1041bp)
protein (347aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_989_8
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

7985..10417
-----------------
DNA (2433bp)
protein (811aa)
peptidase S8/S53 subtilisin kexin sedolisin Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Uncharacterized protein id=1829907 bin=GWB2_Elusimicrobium_63_22 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
peptidase S8/S53 subtilisin kexin sedolisin
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_989_9
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

10499..10696
-----------------
DNA (198bp)
protein (66aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAT6_9BACT
hypothetical protein; K09922 hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
hypothetical protein
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_989_10
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

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10709..12475
-----------------
DNA (1767bp)
protein (589aa)
PIF1 helicase Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
PIF1 helicase id=2882907 bin=GWF2_OP3_43_52 species=Anaerobaculum mobile genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
PIF1 helicase
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_989_11
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

12472..12648
-----------------
DNA (177bp)
protein (59aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAT6_9BACT
hypothetical protein; K09922 hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
hypothetical protein
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_989_12
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

13031..15028
-----------------
DNA (1998bp)
protein (666aa)
PAS/PAC sensor hybrid histidine kinase Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
PAS domain S-box id=3807061 bin=GWF2_Lentisphaerae_49_21 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
PAS/PAC sensor hybrid histidine kinase
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_989_13
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

15021..18164
-----------------
DNA (3144bp)
protein (1048aa)
RecB-like exodeoxyribonuclease V beta chain Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
RecB-like exodeoxyribonuclease V beta chain id=4308524 bin=GWA2_OP3_53_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
RecB-like exodeoxyribonuclease V beta chain
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_989_14
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

18151..18408
-----------------
DNA (258bp)
protein (86aa)
Methyltransferase type 11 n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WM24_METH6
type 11 methyltransferase Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
type 11 methyltransferase
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_989_15
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

18430..18897
-----------------
DNA (468bp)
protein (156aa)
Methyltransferase type 11 n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GRE9_THISH
type 11 methyltransferase Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
type 11 methyltransferase
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_989_16
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

19117..19443
-----------------
DNA (327bp)
protein (109aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IJJ3_9PLAN
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
hypothetical protein
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_989_17
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(19659..20729)
-----------------
DNA (1071bp)
protein (357aa)
ISPg1, transposase n=1 Tax=uncultured bacterium RepID=K2C4A4_9BACT
transposase IS4 family Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
transposase IS4 family
Displaying 17 items

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