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RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_498

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_498_1
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(289..2412)
-----------------
DNA (2124bp)
protein (708aa)
glnA; glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2] Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Glutamine synthetase catalytic region id=4336302 bin=GWA2_Elusimicrobia_69_24 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
glutamine synthetase
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_498_2
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

2780..3385
-----------------
DNA (606bp)
protein (202aa)
Uncharacterized protein n=1 Tax=Paenibacillus terrae (strain HPL-003) RepID=G7VY96_PAETH
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
hypothetical protein
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_498_3
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

3472..3849
-----------------
DNA (378bp)
protein (126aa)
Stage 0 sporulation protein F n=1 Tax=Bacillus clausii (strain KSM-K16) RepID=Q5WB45_BACSK
spo0F; stage 0 sporulation protein F; K02490 two-component system, response regulator, stage 0 sporulation protein F Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Sporulation initiation phosphotransferase F
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_498_4
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

3878..5002
-----------------
DNA (1125bp)
protein (375aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_498_5
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

5015..5530
-----------------
DNA (516bp)
protein (172aa)
hypothetical protein; K09705 hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Putative uncharacterized protein id=2970922 bin=GWC1_Spirochaetes_27_15 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
hypothetical protein
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_498_6
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(5520..7358)
-----------------
DNA (1839bp)
protein (613aa)
alpha-L-arabinofuranosidase; K01209 alpha-N-arabinofuranosidase [EC:3.2.1.55] Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Alpha-L-arabinofuranosidase domain protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NHL0_DESAR
alpha-L-arabinofuranosidase
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_498_7
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

7492..8331
-----------------
DNA (840bp)
protein (280aa)
peptidase U61 LD-carboxypeptidase A; K01297 muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Peptidase U61 LD-carboxypeptidase A id=2027295 bin=GWD2_RBX1-related_39_127 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
peptidase U61 LD-carboxypeptidase A
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_498_8
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

8341..8925
-----------------
DNA (585bp)
protein (195aa)
spore maturation protein A; K06373 spore maturation protein A Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Spore maturation protein A id=2027293 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
spore maturation protein A
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_498_9
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

8922..9449
-----------------
DNA (528bp)
protein (176aa)
spore maturation protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00036CDCD9
nucleoside recognition domain-containing protein; K06374 spore maturation protein B Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
nucleoside recognition domain-containing protein
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_498_10
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

9617..10321
-----------------
DNA (705bp)
protein (235aa)
glutamine amidotransferases class-II; K07008 glutamine amidotransferase Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Glutamine amidotransferases class-II id=4014171 bin=GWF2_OP9-related_38_17 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
glutamine amidotransferases class-II
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_498_11
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

10318..11553
-----------------
DNA (1236bp)
protein (412aa)
HI0933 family protein n=1 Tax=Thermincola potens (strain JR) RepID=D5X793_THEPJ
hypothetical protein; K07007 Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
hypothetical protein
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_498_12
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(11522..12247)
-----------------
DNA (726bp)
protein (242aa)
Pyruvate formate-lyase 1-activating enzyme n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K3X8_CLOPA
pyruvate formate-lyase 1-activating enzyme Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
pyruvate formate-lyase 1-activating enzyme
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_498_13
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(12524..14755)
-----------------
DNA (2232bp)
protein (744aa)
Pyruvate formate-lyase (EC:2.3.1.54) Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
formate acetyltransferase n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002DABBF4
formate acetyltransferase
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_498_14
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

15353..24475
-----------------
DNA (9123bp)
protein (3041aa)
RHS repeat-associated core domain protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Cell wall surface anchor family protein id=4894122 bin=GWA2_Elusi-like_A8_64_40 species=Streptococcus sanguinis genus=Streptococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Elusi-like_A8_64_40 organism_group=Elusimicrobia
RHS repeat-associated core domain protein
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_498_15
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

24497..24730
-----------------
DNA (234bp)
protein (78aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_498_16
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

24802..25404
-----------------
DNA (603bp)
protein (201aa)
Marine sediment metagenome DNA, contig: S01H1_L06590 Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_498_17
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

25542..26792
-----------------
DNA (1251bp)
protein (417aa)
tolC; outer membrane export factor; K12340 outer membrane channel protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Outer membrane export factor id=3654317 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
tolC; outer membrane export factor
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_498_18
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

27110..27577
-----------------
DNA (468bp)
protein (156aa)
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Putative uncharacterized protein id=1857607 bin=GWE2_Gammaproteobacteria_37_16 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWE2_Gammaproteobacteria_37_16 organism_group=Gammaproteobacteria organism_desc=Looks good, but small
hypothetical protein
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_498_19
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

27636..30737
-----------------
DNA (3102bp)
protein (1034aa)
acrF; acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Acriflavin resistance protein id=2962520 bin=GWC2_Elusimicrobia_64_44 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
acrF; acriflavin resistance protein
RIFOXYA2_FULL_Elusimicrobia_rel_39_19_rifoxya2_full_scaffold_498_20
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(30757..31029)
-----------------
DNA (273bp)
protein (91aa)
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Putative uncharacterized protein id=1702996 bin=GWB2_Nitrospirae_rel_47_37 species=Leptospirillum sp. Group II '5-way CG' genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
Displaying 20 items

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