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13_1_40cm_2_scaffold_100825

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_100825_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3..569
DNA (567bp) protein (189aa)
pilM; type IV pilus biogenesis protein PilM; K02662 type IV pilus assembly protein PilM Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Type IV pilus assembly protein PilM id=4953742 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
type IV pilus assembly protein PilM
13_1_40cm_2_scaffold_100825_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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566..1129
DNA (564bp) protein (188aa)
fimbrial assembly family protein; K02663 type IV pilus assembly protein PilN Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
fimbrial assembly family protein; K02663 type IV pilus assembly protein PilN id=14625682 bin=bin7_NC10_sister species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
fimbrial assembly family protein
13_1_40cm_2_scaffold_100825_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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1131..1730
DNA (600bp) protein (200aa)
pilus assembly protein PilO; K02664 type IV pilus assembly protein PilO Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14625683 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Pilus assembly protein PilO
13_1_40cm_2_scaffold_100825_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1742..2197
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4614259 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_2_scaffold_100825_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2222..3001
DNA (780bp) protein (260aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Type II secretory pathway, component HofQ id=4094956 bin=GWC2_Methylomirabilis_70_24 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
pilQ; pilus secretin
Displaying 5 items

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