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13_1_40cm_2_scaffold_1177

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1177_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1170
DNA (1170bp) protein (390aa)
h16_A2949; ABC transporter periplasmic protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Glutathione ABC transport system substrate binding protein GsiB id=4621965 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
h16_A2949; ABC transporter periplasmic protein
13_1_40cm_2_scaffold_1177_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1186..1476
DNA (291bp) protein (97aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=5015981 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_1177_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1501..3774
DNA (2274bp) protein (758aa)
Alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15); K00697 trehalose 6-phosphate synthase [EC:2.4.1.15] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) id=4183572 bin=GWF2_Methylomirabilis_70_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_40cm_2_scaffold_1177_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3777..4550
DNA (774bp) protein (258aa)
beta-phosphoglucomutase hydrolase (EC:2.4.1.216) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
beta-phosphoglucomutase hydrolase (EC:2.4.1.216)
Beta-phosphoglucomutase hydrolase id=5032672 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_1177_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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4587..5252
DNA (666bp) protein (222aa)
Uncharacterized protein id=5032669 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
cytoplasmic protein
13_1_40cm_2_scaffold_1177_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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5249..6439
DNA (1191bp) protein (397aa)
group 1 glycosyl transferase; K13057 trehalose synthase [EC:2.4.1.245] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase group 1 id=5032668 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
group 1 glycosyl transferase
13_1_40cm_2_scaffold_1177_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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6436..7695
DNA (1260bp) protein (420aa)
putative glycosyl transferase, family 2 (EC:2.4.-.-)
glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Glycosyl transferase, family 2 id=5032667 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_1177_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7757..9436
DNA (1680bp) protein (560aa)
trehalose synthase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Trehalose synthase id=4882695 bin=GWC2_Methylomirabilis_70_24 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
trehalose synthase
13_1_40cm_2_scaffold_1177_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9411..11027
DNA (1617bp) protein (539aa)
1,4-alpha-glucan branching protein; K00700 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
1,4-alpha-glucan branching enzyme GlgB id=4799905 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
trehalose synthase/maltokinase
13_1_40cm_2_scaffold_1177_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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11086..11724
DNA (639bp) protein (213aa)
OmpA/MotB domain protein Tax=GWC2_Rokubacteria_70_16_curated
OmpA/MotB domain protein id=4034147 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
OmpA/MotB domain protein
13_1_40cm_2_scaffold_1177_11
unknown

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comp(11958..12158)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_2_scaffold_1177_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12960..13832
DNA (873bp) protein (291aa)
Putative sugar ABC transporter permease n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MV04_CORCM
thuF; putative sugar ABC transporter permease; K02025 multiple sugar transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
thuF; putative sugar ABC transporter permease
13_1_40cm_2_scaffold_1177_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13829..14506
DNA (678bp) protein (226aa)
Putative ABC transporter permease protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFR4_9BACT
ABC transporter permease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter permease
Displaying 13 items

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