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13_1_40cm_2_scaffold_1269

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1269_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2..142)
DNA (141bp) protein (47aa)
crotonyl-CoA reductase; K14446 crotonyl-CoA carboxylase/reductase [EC:1.3.1.85] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Crotonyl-CoA reductase id=3646800 bin=GWC2_Methylomirabilis_70_16 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
crotonyl-CoA reductase
13_1_40cm_2_scaffold_1269_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(135..1166)
DNA (1032bp) protein (344aa)
luciferase family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Luciferase family protein id=3646803 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
luciferase family protein
13_1_40cm_2_scaffold_1269_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1275..1712)
DNA (438bp) protein (146aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14627394 bin=bin7_NC10_sister species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_1269_4
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(1723..2196)
DNA (474bp) protein (158aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein id=14627393 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_1269_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2264..2725
DNA (462bp) protein (154aa)
Transcriptional regulator, HxlR family n=3 Tax=Geobacillus RepID=E3IGU0_GEOS0
HxlR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
HxlR family transcriptional regulator
13_1_40cm_2_scaffold_1269_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(2739..3854)
DNA (1116bp) protein (372aa)
2-nitropropane dioxygenase; K00459 nitronate monooxygenase [EC:1.13.12.16] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
2-nitropropane dioxygenase NPD n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6D0Y5_PAESJ
2-nitropropane dioxygenase NPD
13_1_40cm_2_scaffold_1269_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3857..4753)
DNA (897bp) protein (299aa)
id=3202777 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=3202777 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
13_1_40cm_2_scaffold_1269_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(4737..5921)
DNA (1185bp) protein (395aa)
coA-transferase III family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
L-carnitine dehydratase/bile acid-inducible protein F id=3227645 bin=GWC2_Methylomirabilis_70_24 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
coA-transferase III family protein
13_1_40cm_2_scaffold_1269_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5918..6064)
DNA (147bp) protein (49aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_2_scaffold_1269_10
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6180..6515)
DNA (336bp) protein (112aa)
GlcG protein n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3UED6_ADVKW
Uncharacterized protein {ECO:0000313|EMBL:ETX07444.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
GlcG protein
13_1_40cm_2_scaffold_1269_11
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(6915..7598)
DNA (684bp) protein (228aa)
aldehyde dehydrogenase n=1 Tax=Alicyclobacillus pohliae RepID=UPI000362186C
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein
13_1_40cm_2_scaffold_1269_12
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7656..8384)
DNA (729bp) protein (243aa)
Transcriptional regulator, GntR family n=1 Tax=Thermincola potens (strain JR) RepID=D5X921_THEPJ
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADG81021.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (
13_1_40cm_2_scaffold_1269_13
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

8398..9438
DNA (1041bp) protein (347aa)
gentisate 1,2-dioxygenase (EC:1.13.11.4); K00450 gentisate 1,2-dioxygenase [EC:1.13.11.4] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Gentisate 1,2-dioxygenase n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S8P6_9BURK
gentisate 1,2-dioxygenase
13_1_40cm_2_scaffold_1269_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9466..10509)
DNA (1044bp) protein (348aa)
GAF/GGDEF domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Diguanylate cyclase with GAF sensor id=4699803 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GAF sensor-containing diguanylate cyclase
13_1_40cm_2_scaffold_1269_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10518..11525)
DNA (1008bp) protein (336aa)
GAF/GGDEF domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Diguanylate cyclase with GAF sensor id=4699803 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GAF sensor-containing diguanylate cyclase
13_1_40cm_2_scaffold_1269_16
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(11606..12676)
DNA (1071bp) protein (357aa)
GAF sensor-containing diguanylate cyclase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
GAF/GGDEF domain-containing protein id=4699804 bin=GWA2_Methylomirabilis_73_35 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
GAF sensor-containing diguanylate cyclase
13_1_40cm_2_scaffold_1269_17
unknown

Not on your lists

comp(12852..13658)
DNA (807bp) protein (269aa)

This feature has no annotations

13_1_40cm_2_scaffold_1269_18
unknown

Not on your lists

comp(13662..14471)
DNA (810bp) protein (270aa)

This feature has no annotations

13_1_40cm_2_scaffold_1269_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14966..15502)
DNA (537bp) protein (179aa)
oxidoreductase Tax=GWA2_Rokubacteria_73_35_curated
Putative N5,N10-methylenetetrahydromethanopterin reductase-related protein id=4935480 bin=GWC2_Methylomirabilis_70_24 species=marine gamma proteobacterium HTCC2143 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Hypothetical protein
13_1_40cm_2_scaffold_1269_20
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(15778..16569)
DNA (792bp) protein (264aa)
Lactoylglutathione lyase-like lyase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DG31_SINAD
lactoylglutathione lyase-like lyase
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:AGA27626.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singul
13_1_40cm_2_scaffold_1269_21
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(16566..17516)
DNA (951bp) protein (317aa)
formamidase (EC:3.5.1.49) Tax=GWC2_Rokubacteria_70_16_curated
Formamidase (EC:3.5.1.49)
Formamidase id=4766431 bin=GWC2_Methylomirabilis_70_16 species=Bacillus selenitireducens genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
13_1_40cm_2_scaffold_1269_22
Amorphus coralli, Amorphus, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18343..18684)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000381661B
13_1_40cm_2_scaffold_1269_23
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18677..19060)
DNA (384bp) protein (128aa)
cupin 2 barrel domain-containing protein Tax=RBG_16_Betaproteobacteria_64_18_curated
Putative uncharacterized protein id=2193858 bin=GWB2_Deltaproteobacteria_65_81 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
13_1_40cm_2_scaffold_1269_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

19245..21698
DNA (2454bp) protein (818aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3) Tax=GWA2_Rokubacteria_73_35_curated
Putative PAS/PAC sensor protein id=4699808 bin=GWA2_Methylomirabilis_73_35 species=Actinosynnema mirum genus=Actinosynnema taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
PAS/PAC sensor protein
13_1_40cm_2_scaffold_1269_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

21890..22945
DNA (1056bp) protein (352aa)
ABC transporter substrate binding protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I9I4_AZOC5
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter substrate-binding protein
13_1_40cm_2_scaffold_1269_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

22945..24774
DNA (1830bp) protein (610aa)
Branched-chain amino acid ABC-type transport system n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W794_MAGSA rbh
branched chain amino acid ABC transporter; K01997 branched-chain amino acid transport system permease protein; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FUL
branched chain amino acid ABC transporter
13_1_40cm_2_scaffold_1269_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

24767..25525
DNA (759bp) protein (253aa)
Branched-chain amino acid ABC transporter, ATP-binding component (LivG-like) n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z8N4_AZOL4
branched-chain amino acid ABC transporter, ATP-binding component (LivG-like); K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
branched-chain amino acid ABC transporter, ATP-binding component (LivG-like)
13_1_40cm_2_scaffold_1269_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

25513..26214
DNA (702bp) protein (234aa)
Branched-chain amino acid ABC transporter,ATP-binding component (LivF-like) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AER0_AZOBR
branched-chain amino acid ABC transporter,ATP-binding component (LivF-like) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter
13_1_40cm_2_scaffold_1269_29
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

26211..27386
DNA (1176bp) protein (392aa)
Cytosine deaminase-like metal-dependent hydrolase id=4814550 bin=GWC2_Methylomirabilis_70_16 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
cytosine deaminase-like metal-dependent hydrolase Tax=GWC2_Rokubacteria_70_16_curated
amidohydrolase
13_1_40cm_2_scaffold_1269_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

27389..28636
DNA (1248bp) protein (416aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14626658 bin=bin7_NC10_sister species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Displaying items 1-30 of 37 in total

View Taxonomy