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13_1_40cm_2_scaffold_27010

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_27010_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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1..480
DNA (480bp) protein (160aa)
TRAP-type C4-dicarboxylate transporter n=1 Tax=Rhodovulum sp. PH10 RepID=J6UIP5_9RHOB
dctQ1; TRAP transporter small permease subunit DctQ Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Sialic acid TRAP transporter permease protein siaT
13_1_40cm_2_scaffold_27010_2
unknown

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comp(870..1157)
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_40cm_2_scaffold_27010_3
unknown

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comp(1284..1556)
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_40cm_2_scaffold_27010_4
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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1897..2208
DNA (312bp) protein (104aa)
hypothetical protein Tax=RBG_16_Chloroflexi_64_32_curated
13_1_40cm_2_scaffold_27010_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(2195..3061)
DNA (867bp) protein (289aa)
tartronate semialdehyde reductase (EC:1.1.1.60)
Tartronate semialdehyde reductase id=4547685 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Rahnella taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2-hydroxy-3-oxopropionate reductase Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_2_scaffold_27010_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(3061..4305)
DNA (1245bp) protein (415aa)
Extracellular ligand-binding receptor id=2654115 bin=GWC2_Methylomirabilis_70_24 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Extracellular ligand-binding receptor Tax=GWA2_Rokubacteria_70_23_curated
Extracellular ligand-binding receptor
13_1_40cm_2_scaffold_27010_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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4461..5102
DNA (642bp) protein (214aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14627784 bin=bin7_NC10_sister species=Chlorobium ferrooxidans genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_27010_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5152..5646
DNA (495bp) protein (165aa)
id=4885132 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=4885132 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_2_scaffold_27010_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(5683..6369)
DNA (687bp) protein (229aa)
hypothetical protein; K07090 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4766447 bin=GWC2_Methylomirabilis_70_16 species=Thioalkalivibrio nitratireducens genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
glutamine amidotransferase
13_1_40cm_2_scaffold_27010_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6402..7910)
DNA (1509bp) protein (503aa)
glpC; D-lactate dehydrogenase (cytochrome) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glr3436 protein id=3830908 bin=GWF2_Methylomirabilis_70_14 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oxidoreductase
Displaying 10 items

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