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13_1_40cm_4_scaffold_7622

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_7622_1
unknown

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comp(3..62)
DNA (60bp) protein (20aa)

This feature has no annotations

13_1_40cm_4_scaffold_7622_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(67..765)
DNA (699bp) protein (233aa)
Beta-propeller domain-containing protein, methanol dehydrogenase id=4766717 bin=GWA2_Methylomirabilis_73_35 species=Microvirga sp. WSM3557 genus=Microvirga taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein; K06872 uncharacterized protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_4_scaffold_7622_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(827..1423)
DNA (597bp) protein (199aa)
LemA family protein id=4766718 bin=GWA2_Methylomirabilis_73_35 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
LemA family protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_4_scaffold_7622_4
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1483..1776
DNA (294bp) protein (98aa)
GYD family protein n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UBM4_SINMW
GYD family protein
GYD family protein {ECO:0000313|EMBL:ABR61054.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="
13_1_40cm_4_scaffold_7622_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1773..2585
DNA (813bp) protein (271aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=2780661 bin=GWA2_Methylomirabilis_73_35 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_7622_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2593..4194)
DNA (1602bp) protein (534aa)
N-acyl-D-amino-acid deacylase; K06015 N-acyl-D-amino-acid deacylase [EC:3.5.1.81] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
N-acyl-D-amino-acid deacylase (EC:3.5.1.81)
N-acyl-D-amino-acid deacylase id=4884113 bin=GWC2_Methylomirabilis_70_24 species=Thermotoga thermarum genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_4_scaffold_7622_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4364..5569
DNA (1206bp) protein (402aa)
Acyl-CoA dehydrogenase domain protein id=2780651 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acyl-CoA dehydrogenase domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
acyl-CoA dehydrogenase domain-containing protein
13_1_40cm_4_scaffold_7622_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6255..6650
DNA (396bp) protein (132aa)
Acyl-CoA dehydrogenase domain protein id=2780648 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acyl-CoA dehydrogenase domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
acyl-CoA dehydrogenase domain-containing protein
13_1_40cm_4_scaffold_7622_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6677..7636
DNA (960bp) protein (320aa)
glucose dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glucose dehydrogenase (GDH) id=2780646 bin=GWA2_Methylomirabilis_73_35 species=Thermoproteus uzoniensis genus=Thermoproteus taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glucose dehydrogenase
Displaying 9 items

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