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13_1_20cm_4_scaffold_1108

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1108_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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3..824
DNA (822bp) protein (274aa)
dihydropyrimidinase; K01464 dihydropyrimidinase [EC:3.5.2.2] Tax=CSP1_6_Rokubacteria
dihydropyrimidinase; K01464 dihydropyrimidinase [EC:3.5.2.2] id=14625343 bin=bin7_NC10_sister species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
dihydropyrimidinase (EC:3.5.2.2)
13_1_20cm_4_scaffold_1108_2
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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847..1683
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I772_CALAS
Uncharacterized protein {ECO:0000313|EMBL:BAM01110.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
hypothetical protein
13_1_20cm_4_scaffold_1108_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1718..1837)
DNA (120bp) protein (40aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=4334200 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_1108_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1906..2244
DNA (339bp) protein (113aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=GWA2_Rokubacteria_73_35_curated
Histidine triad (HIT) protein id=4334202 bin=GWA2_Methylomirabilis_73_35 species=Thiothrix nivea genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
histidine triad (HIT) protein
13_1_20cm_4_scaffold_1108_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2237..3592
DNA (1356bp) protein (452aa)
adenylosuccinate lyase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Adenylosuccinate lyase id=2598310 bin=GWA2_Methylomirabilis_73_35 species=Azotobacter vinelandii genus=Azotobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
adenylosuccinate lyase
13_1_20cm_4_scaffold_1108_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3727..5007)
DNA (1281bp) protein (427aa)
peptidase S46 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptidase S46 id=2598295 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
periplasmic serine proteinase
13_1_20cm_4_scaffold_1108_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5159..5677)
DNA (519bp) protein (173aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=2598292 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
collagen triple helix repeat protein
13_1_20cm_4_scaffold_1108_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5947..7308
DNA (1362bp) protein (454aa)
peptidase M16 domain protein; K07263 zinc protease [EC:3.4.24.-] Tax=GWA2_Rokubacteria_73_35_curated
peptidase, m16 (pitrilysin) family (EC:3.4.24.-)
Peptidase M16 domain protein id=2598289 bin=GWA2_Methylomirabilis_73_35 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_20cm_4_scaffold_1108_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7305..8615
DNA (1311bp) protein (437aa)
processing peptidase (EC:3.4.24.64) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
processing peptidase (EC:3.4.24.64)
Peptidase M16B family, nonpeptidase-like protein id=2598286 bin=GWA2_Methylomirabilis_73_35 species=Leptolyngbya sp. PCC 6406 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_1108_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8612..9328
DNA (717bp) protein (239aa)
peptidase, S54 (Rhomboid) family Tax=GWA2_Rokubacteria_73_35_curated
Putative peptidase, S54 (Rhomboid) family id=2598285 bin=GWA2_Methylomirabilis_73_35 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase, S54 (Rhomboid) family
13_1_20cm_4_scaffold_1108_11
unknown

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9328..9414
DNA (87bp) protein (29aa)

This feature has no annotations

Displaying 11 items

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