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13_1_20cm_4_scaffold_1622

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1622_1
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..856
DNA (855bp) protein (285aa)
SusD family protein n=2 Tax=Bacteroides RepID=A7V8P5_BACUN
SusD family protein {ECO:0000313|EMBL:EDO52351.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
RagB/SusD domain-containing protein
13_1_20cm_4_scaffold_1622_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1028..1510
DNA (483bp) protein (161aa)
TonB-dependent receptor plug n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJI9_RHOM4
TonB-dependent receptor plug {ECO:0000313|EMBL:ACY48647.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" s
TonB-dependent receptor plug
13_1_20cm_4_scaffold_1622_3
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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1553..2800
DNA (1248bp) protein (416aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=CSP1_4_Chloroflexi
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] id=14628995 bin=bin8_Chloro species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
13_1_20cm_4_scaffold_1622_4
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2754..4028)
DNA (1275bp) protein (425aa)
Acriflavin resistance protein n=1 Tax=planctomycete KSU-1 RepID=I3IKQ5_9PLAN
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
acriflavin resistance protein
13_1_20cm_4_scaffold_1622_5
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3995..5716)
DNA (1722bp) protein (574aa)
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=CSP1_8_Deltaproteobacteria
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=14623092 bin=bin5_DeltaP species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
acriflavin resistance protein
13_1_20cm_4_scaffold_1622_6
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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comp(5713..6828)
DNA (1116bp) protein (372aa)
RND family efflux transporter MFP subunit; K07799 putative multidrug efflux transporter MdtA Tax=GWC2_Nitrospirae_57_13_curated
Efflux transporter, RND family, MFP subunit id=3720835 bin=GWC2_Nitrospirae_57_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
efflux transporter, RND family, MFP subunit
13_1_20cm_4_scaffold_1622_7
RLO_RIF05_58_11, RIF5, Bacteria

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comp(6829..8391)
DNA (1563bp) protein (521aa)
outer membrane efflux protein Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
outer membrane efflux protein id=14426073 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
outer membrane efflux protein
13_1_20cm_4_scaffold_1622_8
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

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8671..11757
DNA (3087bp) protein (1029aa)
AcrB/AcrD/AcrF family protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RBG_16_Zixibacteria_53_22_curated
AcrB/AcrD/AcrF family protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=24506371 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin rbh
multidrug transporter AcrB
13_1_20cm_4_scaffold_1622_9
unknown

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11757..12062
DNA (306bp) protein (102aa)

This feature has no annotations

Displaying 9 items

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