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13_1_20cm_4_scaffold_2510

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_2510_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2..964
DNA (963bp) protein (321aa)
hypothetical protein; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-] id=14626218 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_2510_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

948..1487
DNA (540bp) protein (180aa)
hypothetical membrane protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Hypothetical membrane protein id=3806666 bin=GWA2_Methylomirabilis_73_35 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Protein of unknown function DUF3341
13_1_20cm_4_scaffold_2510_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1484..1990
DNA (507bp) protein (169aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Alcohol dehydrogenase large subunit id=3806665 bin=GWA2_Methylomirabilis_73_35 species=Mariprofundus ferrooxydans genus=Mariprofundus taxon_order=Mariprofundales taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cytochrome c class I
13_1_20cm_4_scaffold_2510_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1987..3096
DNA (1110bp) protein (370aa)
mopC; protein MopC Tax=GWA2_Rokubacteria_73_35_curated
MopC id=3806664 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
mopC; protein MopC
13_1_20cm_4_scaffold_2510_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3212..4429
DNA (1218bp) protein (406aa)
molybdopterin biosynthesis protein MoeA; K03750 molybdopterin molybdotransferase [EC:2.10.1.1] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Molybdenum cofactor synthesis domain protein id=3806663 bin=GWA2_Methylomirabilis_73_35 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
molybdenum cofactor synthesis domain-containing protein
13_1_20cm_4_scaffold_2510_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4464..5405
DNA (942bp) protein (314aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Tol-pal system protein YbgF id=3806662 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tol-pal system protein
13_1_20cm_4_scaffold_2510_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5466..6359
DNA (894bp) protein (298aa)
transcriptional regulator, MarR family; K04096 DNA processing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
DNA processing chain A (DprA/Smf) id=3806661 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA protecting protein DprA
13_1_20cm_4_scaffold_2510_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6359..8608
DNA (2250bp) protein (750aa)
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
DNA topoisomerase id=3919910 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
DNA topoisomerase I
13_1_20cm_4_scaffold_2510_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8605..9477
DNA (873bp) protein (291aa)
tyrosine recombinase XerD subunit; K03733 integrase/recombinase XerC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Tyrosine recombinase XerC id=4819288 bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
recombinase XerC
13_1_20cm_4_scaffold_2510_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9474..10097
DNA (624bp) protein (208aa)
ATP-dependent protease peptidase subunit; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ATP-dependent protease peptidase subunit; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] id=14626232 bin=bin7_NC10_sister species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
ATP-dependent protease peptidase subunit
13_1_20cm_4_scaffold_2510_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10094..11455
DNA (1362bp) protein (454aa)
hslU; ATPase component of the HslUV protease, also functions as molecular chaperone; heat shock protein Tax=GWA2_Rokubacteria_73_35_curated
ATP-dependent protease ATPase subunit HslU id=3919900 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hslU; ATPase component of the HslUV protease, also functions as molecular chaperone; heat shock protein
13_1_20cm_4_scaffold_2510_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11477..12340
DNA (864bp) protein (288aa)
acetylglutamate kinase (EC:2.7.2.8); K00930 acetylglutamate kinase [EC:2.7.2.8] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase id=3919897 bin=GWA2_Methylomirabilis_73_35 species=Thermovibrio ammonificans genus=Thermovibrio taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
Displaying 12 items

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