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13_1_20cm_4_scaffold_2685

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_2685_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2..1051
DNA (1050bp) protein (350aa)
ferredoxin Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ferredoxin id=14627556 bin=bin7_NC10_sister species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
ferredoxin
13_1_20cm_4_scaffold_2685_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1048..1905
DNA (858bp) protein (286aa)
acyl dehydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
MaoC-like dehydratase id=4306188 bin=GWA2_Methylomirabilis_73_35 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dehydratase
13_1_20cm_4_scaffold_2685_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1952..2365
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein id=3970886 bin=GWC2_Methylomirabilis_70_16 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_20cm_4_scaffold_2685_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2718..3770
DNA (1053bp) protein (351aa)
uroporphyrinogen decarboxylase (URO-D); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uroporphyrinogen decarboxylase id=4306186 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
uroporphyrinogen decarboxylase
13_1_20cm_4_scaffold_2685_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3754..4833)
DNA (1080bp) protein (360aa)
GTP-dependent nucleic acid-binding protein EngD; K06942 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
GTP-binding protein YchF id=4306184 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
GTP-dependent nucleic acid-binding protein EngD
13_1_20cm_4_scaffold_2685_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4920..5828
DNA (909bp) protein (303aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14627552 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10 rbh
hypothetical protein
13_1_20cm_4_scaffold_2685_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

5878..6243
DNA (366bp) protein (122aa)
7-cyano-7-deazaguanine reductase (EC:1.7.1.13); K09457 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] Tax=CSP1_6_Rokubacteria
7-cyano-7-deazaguanine reductase (EC:1.7.1.13); K09457 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] id=14627550 bin=bin7_NC10_sister species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
7-cyano-7-deazaguanine reductase
13_1_20cm_4_scaffold_2685_8
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(6240..6806)
DNA (567bp) protein (189aa)
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein id=14627914 bin=bin7_NC10_sister species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_2685_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6861..7727)
DNA (867bp) protein (289aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Membrane protein id=3692272 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Halothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_2685_10
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(7667..8398)
DNA (732bp) protein (244aa)
alpha/beta fold family hydrolase Tax=GWA2_Elusimicrobia_69_24_curated
Hydrolase, alpha/beta fold family id=4829160 bin=GWC2_Methylomirabilis_70_16 species=Pseudomonas putida genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
alpha/beta hydrolase
13_1_20cm_4_scaffold_2685_11
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(8403..8603)
DNA (201bp) protein (67aa)
hypothetical protein Tax=GWA2_Elusimicrobia_69_24_curated
hypothetical protein id=2278853 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
13_1_20cm_4_scaffold_2685_12
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(8777..9316)
DNA (540bp) protein (180aa)
putative transcription termination/antitermination factor NusG Tax=GWA2_Elusimicrobia_69_24_curated
Putative Transcription termination/antitermination factor NusG id=2278851 bin=GWA2_Elusimicrobia_69_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
putative transcription termination/antitermination factor NusG
13_1_20cm_4_scaffold_2685_13
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(9638..10384)
DNA (747bp) protein (249aa)
hypothetical protein Tax=GWA2_Elusimicrobia_69_24_curated
Uncharacterized protein id=2278849 bin=GWA2_Elusimicrobia_69_24 species=Halomonas elongata genus=Halomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
ygbF; tol-pal system protein YbgF
13_1_20cm_4_scaffold_2685_14
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(10381..10890)
DNA (510bp) protein (170aa)
hypothetical protein Tax=GWA2_Elusimicrobia_69_24_curated
hypothetical protein id=2278847 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
13_1_20cm_4_scaffold_2685_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(10891..11811)
DNA (921bp) protein (307aa)
chitooligosaccharide deacetylase (EC:3.5.1.-)
arnD; undecaprenyl phosphate 4-formamido-4-deoxy-L-arabinose deformylase Tax=GWA2_Rokubacteria_70_23_curated
Polysaccharide deacetylase id=4008062 bin=GWC2_Methylomirabilis_70_24 species=Aminomonas paucivorans genus=Aminomonas taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_20cm_4_scaffold_2685_16
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(11793..12746)
DNA (954bp) protein (318aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=GWA2_Elusimicrobia_69_24_curated
NAD-dependent epimerase/dehydratase id=2278843 bin=GWA2_Elusimicrobia_69_24 species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia rbh
NAD-dependent epimerase/dehydratase
13_1_20cm_4_scaffold_2685_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(12743..13684)
DNA (942bp) protein (314aa)
NAD-dependent epimerase/dehydratase; K10011 UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305] T
Bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase id=4775558 bin=GWC2_Methylomirabilis_70_16 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
NAD-dependent epimerase/dehydratase
13_1_20cm_4_scaffold_2685_18
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(13752..14432)
DNA (681bp) protein (227aa)
family 2 glycosyl transferase; K10012 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.7.8.30] Tax=GWA2_Elusimicrobia_69_24_curated
Glycosyl transferase family 2 id=4864560 bin=GWC2_Methylomirabilis_70_16 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
family 2 glycosyl transferase
13_1_20cm_4_scaffold_2685_19
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(14413..15846)
DNA (1434bp) protein (478aa)
3-oxoacyl-(acyl-carrier-protein) synthase 2; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=GWA2_Elusimicrobia_69_24_curated
3-oxoacyl-[acyl-carrier-protein] synthase 2 id=4864558 bin=GWC2_Methylomirabilis_70_16 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
3-oxoacyl-(acyl-carrier-protein) synthase 2
13_1_20cm_4_scaffold_2685_20
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(15821..16588)
DNA (768bp) protein (256aa)
short-chain dehydrogenase/reductase SDR; K10780 enoyl-[acyl carrier protein] reductase III [EC:1.3.1.-] Tax=GWA2_Elusimicrobia_69_24_curated
Enoyl-[acyl-carrier-protein] reductase [NADH] id=4864421 bin=GWC2_Methylomirabilis_70_16 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
short-chain dehydrogenase/reductase SDR
Displaying 20 items

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