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13_1_20cm_4_scaffold_3085

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_3085_1
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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2..538
DNA (537bp) protein (179aa)
ABC transporter related n=2 Tax=Chloroflexus RepID=A9WD50_CHLAA
ABC transporter related {ECO:0000313|EMBL:ABY35017.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus
ABC transporter
13_1_20cm_4_scaffold_3085_2
Geobacillus sp. GHH01, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

535..1347
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI000377A152
Uncharacterized protein {ECO:0000313|EMBL:AGE22037.1}; TaxID=1233873 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. GHH01.;"
hypothetical protein
13_1_20cm_4_scaffold_3085_3
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1387..2205
DNA (819bp) protein (273aa)
Multidrug transporter n=1 Tax=Geobacillus sp. JF8 RepID=S5ZCC7_9BACI
Multidrug transporter {ECO:0000313|EMBL:KEO81686.1}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
multidrug transporter
13_1_20cm_4_scaffold_3085_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2209..2661)
DNA (453bp) protein (151aa)
Heavy-metal resistance protein
Heavy-metal resistance protein {ECO:0000313|EMBL:AHG88946.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Putative uncharacterized protein id=4419195 bin=GWF2_Lentisphaerae_50_93 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
13_1_20cm_4_scaffold_3085_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(2658..3020)
DNA (363bp) protein (121aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_3085_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3017..3523)
DNA (507bp) protein (169aa)
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
RNA polymerase sigma factor, sigma-70 family
RNA polymerase, sigma-24 subunit, ECF subfamily id=4419192 bin=GWF2_Lentisphaerae_50_93 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
13_1_20cm_4_scaffold_3085_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

3679..4389
DNA (711bp) protein (237aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IC00_BEII9 id=5223286 bin=16ft_combo_ws3_JS1 species=Beijerinckia indica genus=Beijerinckia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
glyoxalase/bleomycin resistance protein/dioxygenase; K06996 Tax=RBG_16_RIF_WS3X_71_46_curated
Glyoxalase-like domain protein
13_1_20cm_4_scaffold_3085_8
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4406..5548
DNA (1143bp) protein (381aa)
K+ channel, pore region Tax=GWD2_Desulfuromonadales_54_10_curated
Ion transport 2 domain protein id=1887971 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria rbh
hypothetical protein
13_1_20cm_4_scaffold_3085_9
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5554..5847)
DNA (294bp) protein (98aa)
RNA polymerase sigma factor n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQE7_NOCSJ
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-
ECF subfamily RNA polymerase sigma-24 factor
13_1_20cm_4_scaffold_3085_10
unknown

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5963..6067
DNA (105bp) protein (35aa)

This feature has no annotations

13_1_20cm_4_scaffold_3085_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6204..7100
DNA (897bp) protein (299aa)
Diguanylate cyclase domain protein n=1 Tax=Desulfovibrio sp. A2 RepID=G2H5W5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:AHG90034.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_4_scaffold_3085_12
unknown

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7156..7437
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_20cm_4_scaffold_3085_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7443..8318)
DNA (876bp) protein (292aa)
putative serine/threonine protein kinase (EC:2.7.11.1); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A656_GEMAT
protein kinase
13_1_20cm_4_scaffold_3085_14
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(8335..8958)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5C5H2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAN32972.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="
hypothetical protein
13_1_20cm_4_scaffold_3085_15
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9159..9911)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UI84_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:AKF86984.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
hypothetical protein
13_1_20cm_4_scaffold_3085_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10048..11607)
DNA (1560bp) protein (520aa)
Probable DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407};; Polydeoxyribonucleotide synthase [ATP] {ECO:0000256|HAMAP-Rule:MF_00407}; TaxID=1254432 species="B
ligB; ATP-dependent DNA ligase (EC:6.5.1.1)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003640147
13_1_20cm_4_scaffold_3085_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11629..13194)
DNA (1566bp) protein (522aa)
4-coumarate--CoA ligase {ECO:0000313|EMBL:AEN72609.1}; EC=6.2.1.12 {ECO:0000313|EMBL:AEN72609.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
4-coumarate--CoA ligase (EC:6.2.1.12)
4-coumarate--CoA ligase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SH91_RHOMR
13_1_20cm_4_scaffold_3085_18
GWC2_Elusimicrobia_64_44_curated, Elusimicrobia, Bacteria

Not on your lists

comp(13277..13849)
DNA (573bp) protein (191aa)
hypothetical protein Tax=GWC2_Elusimicrobia_64_44_curated
Putative uncharacterized protein id=3122155 bin=GWC2_Elusimicrobia_64_44 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
13_1_20cm_4_scaffold_3085_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14113..14616)
DNA (504bp) protein (168aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T8_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG92231.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein of unknown function DUF456
13_1_20cm_4_scaffold_3085_20
unknown

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14651..15130
DNA (480bp) protein (160aa)

This feature has no annotations

Displaying 20 items

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