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13_1_20cm_4_scaffold_316

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_316_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..1503)
DNA (1503bp) protein (501aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
protein binding protein id=14626651 bin=bin7_NC10_sister species=Dasypus novemcinctus genus=Dasypus taxon_order=Cingulata taxon_class=Mammalia phylum=Chordata tax=bin7_NC10_sister organism_group=NC10 rbh
hypothetical protein
13_1_20cm_4_scaffold_316_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1497..2456)
DNA (960bp) protein (320aa)
Predicted dehydrogenases and related proteins Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=2338962 bin=GWA2_Methylomirabilis_73_35 species=Subdoligranulum sp. 4_3_54A2FAA genus=Subdoligranulum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative dehydrogenase
13_1_20cm_4_scaffold_316_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2514..3668
DNA (1155bp) protein (385aa)
acaB_8; acetyl-CoA C-acyltransferase 8 (EC:2.3.1.16)
acetyl-CoA C-acyltransferase 8 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Propanoyl-CoA C-acyltransferase id=2338963 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_316_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3661..4041
DNA (381bp) protein (127aa)
putative nucleic-acid-binding protein containing a Zn-ribbon Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=3677765 bin=GWF2_Methylomirabilis_70_14 species=Methanocaldococcus villosus genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_316_5
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

4056..4526
DNA (471bp) protein (157aa)
hypothetical protein Tax=RBG_16_Chloroflexi_68_14_curated
Putative uncharacterized protein id=1699444 bin=GWB2_Chloroflexi_49_20 species=Bacillus sp. M 2-6 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
13_1_20cm_4_scaffold_316_6
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4563..5651)
DNA (1089bp) protein (363aa)
Conserved hypothetical secreted protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K1L6_AZOSB
Conserved hypothetical secreted protein {ECO:0000313|EMBL:CAL92721.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp
hypothetical protein
13_1_20cm_4_scaffold_316_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5775..8093)
DNA (2319bp) protein (773aa)
putative dehydrogenase Tax=GWA2_Rokubacteria_70_23_curated
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein id=3729544 bin=GWF2_Methylomirabilis_70_14 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dehydrogenase
13_1_20cm_4_scaffold_316_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8151..8624)
DNA (474bp) protein (158aa)
coxS; carbon-monoxide dehydrogenase small subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
(2Fe-2S)-binding protein id=2546022 bin=GWA2_Methylomirabilis_73_35 species=Amycolatopsis decaplanina genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
(2Fe-2S)-binding protein
13_1_20cm_4_scaffold_316_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8617..9483)
DNA (867bp) protein (289aa)
carbon-monoxide dehydrogenase; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] Tax=GWA2_Rokubacteria_70_23_curated
carbon-monoxide dehydrogenase (EC:1.2.99.2)
Carbon-monoxide dehydrogenase id=2546018 bin=GWA2_Methylomirabilis_73_35 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_20cm_4_scaffold_316_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9569..12049)
DNA (2481bp) protein (827aa)
molybdopterin binding oxidoreductase large subunit; K03520 carbon-monoxide dehydrogenase large subunit [EC:1.2.99.2] Tax=GWA2_Rokubacteria_70_23_curated
Molybdopterin binding oxidoreductase large subunit id=3729535 bin=GWF2_Methylomirabilis_70_14 species=Geobacillus kaustophilus genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
molybdopterin binding oxidoreductase large subunit
13_1_20cm_4_scaffold_316_11
unknown

Not on your lists

comp(12095..12319)
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_20cm_4_scaffold_316_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12340..13536)
DNA (1197bp) protein (399aa)
amidohydrolase 3; K15358 enamidase [EC:3.5.2.18] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Amidohydrolase 3 n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L3H1_THERP
amidohydrolase 3
13_1_20cm_4_scaffold_316_13
Bacillus simplex, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13762..15234)
DNA (1473bp) protein (491aa)
4-hydroxyphenylacetate 3-hydroxylase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J7M2_HYPSM
4-hydroxyphenylacetate-3-hydroxylase {ECO:0000313|EMBL:CEG31104.1}; TaxID=1478 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus simplex.;"
4-hydroxyphenylacetate 3-hydroxylase
13_1_20cm_4_scaffold_316_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15367..15801
DNA (435bp) protein (145aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=2545784 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_316_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15916..16194
DNA (279bp) protein (93aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=2545782 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_316_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

16191..16826
DNA (636bp) protein (212aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
id=2724780 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_20cm_4_scaffold_316_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

16823..17260
DNA (438bp) protein (146aa)
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Extracellular ligand-binding receptor id=2545775 bin=GWA2_Methylomirabilis_73_35 species=Dinoroseobacter shibae genus=Dinoroseobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid/amide ABC transporter substrate-binding protein, HAAT family
Displaying 17 items

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