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13_1_20cm_2_scaffold_1142

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1142_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists


1..978
DNA (978bp) protein (326aa)
Protein translocase subunit SecY n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LQB7_SYNAS
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
secY; preprotein translocase subunit SecY
13_1_20cm_2_scaffold_1142_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

978..1646
DNA (669bp) protein (223aa)
adenylate kinase family protein (EC:2.7.4.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Adenylate kinase n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AA58_THEID
adenylate kinase
13_1_20cm_2_scaffold_1142_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

1643..2437
DNA (795bp) protein (265aa)
map; methionine aminopeptidase (EC:3.4.11.18) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
map; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKJ0_9BACT
13_1_20cm_2_scaffold_1142_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2439..2657
DNA (219bp) protein (73aa)
translation initiation factor IF-1 n=1 Tax=Alicyclobacillus pohliae RepID=UPI00035CD911
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
infA; translation initiation factor IF-1
13_1_20cm_2_scaffold_1142_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2772..2885
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GJ61_PROFC
hypothetical protein; K02919 large subunit ribosomal protein L36 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_20cm_2_scaffold_1142_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


2976..3404
DNA (429bp) protein (143aa)
30S ribosomal protein S13 n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IIR5_THETR
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
30S ribosomal protein S13
13_1_20cm_2_scaffold_1142_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists


3408..3818
DNA (411bp) protein (137aa)
30S ribosomal protein S11 n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RPP0_9FIRM
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=GWA2_Rokubacteria_73_35_curated
30S ribosomal protein S11
13_1_20cm_2_scaffold_1142_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists


3828..4451
DNA (624bp) protein (208aa)
30S ribosomal protein S4 n=2 Tax=Geobacter sulfurreducens RepID=RS4_GEOSL
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
rpsD; 30S ribosomal protein S4
13_1_20cm_2_scaffold_1142_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

4462..5445
DNA (984bp) protein (328aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=RPOA_SYMTH
13_1_20cm_2_scaffold_1142_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists


5442..5918
DNA (477bp) protein (159aa)
50S ribosomal protein L17 n=1 Tax=Geobacter sp. (strain M21) RepID=RL17_GEOSM
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
50S ribosomal protein L17
13_1_20cm_2_scaffold_1142_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5958..6632)
DNA (675bp) protein (225aa)
dienelactone hydrolase-like enzyme (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
dienelactone hydrolase-like enzyme (EC:3.1.1.45)
Dienelactone hydrolase-like enzyme n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEN1_CHLTF
13_1_20cm_2_scaffold_1142_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6644..7897)
DNA (1254bp) protein (418aa)
CBS domain-containing protein n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0KB95_HALHC
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
CBS domain-containing protein
13_1_20cm_2_scaffold_1142_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7894..9168)
DNA (1275bp) protein (425aa)
Putative uncharacterized protein n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QVA3_ACEAZ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_20cm_2_scaffold_1142_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9161..10192)
DNA (1032bp) protein (344aa)
thiamine-monophosphate kinase; K00946 thiamine-monophosphate kinase [EC:2.7.4.16] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Thiamine-monophosphate kinase n=2 Tax=Geobacter metallireducens RepID=Q39QP8_GEOMG
thiL; thiamin monophosphate kinase
13_1_20cm_2_scaffold_1142_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10189..10755)
DNA (567bp) protein (189aa)
trpG; anthranilate synthase component II (EC:4.1.3.27); K01658 anthranilate synthase component II [EC:4.1.3.27] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Glutamine amidotransferase of anthranilate synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVB1_9BACT
glutamine amidotransferase of anthranilate synthase
13_1_20cm_2_scaffold_1142_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10775..11149)
DNA (375bp) protein (125aa)
trpE; anthranilate synthase, component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Anthranilate synthase component I n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K7Q8_HALHC
anthranilate synthase component I
Displaying 16 items

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