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13_1_20cm_2_scaffold_4480

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_4480_1
unknown

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1..159
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_20cm_2_scaffold_4480_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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348..644
DNA (297bp) protein (99aa)
RNP-1 like RNA-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
RNP-1 like RNA-binding protein alias=gwe2_scaffold_654_32 id=2130164 tax=GWE2_OD1_40_11 species=Comamonadaceae genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria
RNP-1 like RNA-binding protein
13_1_20cm_2_scaffold_4480_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

649..864
DNA (216bp) protein (72aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_4480_4
unknown

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866..1138
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_20cm_2_scaffold_4480_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

1157..1744
DNA (588bp) protein (196aa)
Tax=CSP1_6_Rokubacteria
13_1_20cm_2_scaffold_4480_6
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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1936..2460
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CN66_SIDLE
hypothetical protein Tax=RBG_16_Gamma2_64_11_curated
hypothetical protein
13_1_20cm_2_scaffold_4480_7
Burkholderia lata, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2495..3475)
DNA (981bp) protein (327aa)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase {ECO:0000313|EMBL:ABB06697.1}; EC=4.1.1.68 {ECO:0000313|EMBL:ABB06697.1};; TaxID=482957 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase (EC:4.1.1.68)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39LG9_BURS3 rbh
13_1_20cm_2_scaffold_4480_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(3489..4454)
DNA (966bp) protein (322aa)
Alcohol dehydrogenase, zinc-binding domain protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK52_9BACT
Alcohol dehydrogenase, zinc-binding domain protein {ECO:0000313|EMBL:CBE69674.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomira
alcohol dehydrogenase
13_1_20cm_2_scaffold_4480_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4451..5665)
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030E032F
ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter substrate-binding protein
13_1_20cm_2_scaffold_4480_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5691..6401)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003170FDD
branched-chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
high-affinity branched-chain amino acid ABC transporter ATP-binding protein
13_1_20cm_2_scaffold_4480_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6394..8136)
DNA (1743bp) protein (581aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000319FA33 rbh
branched-chain amino acid ABC transporter permease; K01995 branched-chain amino acid transport system ATP-binding protein; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_R
high-affinity branched-chain amino acid ABC transporter ATP-binding protein
13_1_20cm_2_scaffold_4480_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8133..8981)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000372DCD9
branched-chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
high-affinity branched-chain amino acid ABC transporter permease protein
13_1_20cm_2_scaffold_4480_13
unknown

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9126..9494
DNA (369bp) protein (123aa)

This feature has no annotations

13_1_20cm_2_scaffold_4480_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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9610..10842
DNA (1233bp) protein (411aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QR08_9CYAN
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:CDM64147.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphat
cusA; heavy metal efflux pump, CzcA family
Displaying 14 items

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