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13_1_20cm_2_scaffold_3650

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_3650_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1..198
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00036D5895
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
cyclase
13_1_20cm_2_scaffold_3650_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(261..1265)
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Streptomyces sp. HmicA12 RepID=UPI000377EE0B
Luciferase-like monooxygenase Tax=GWA2_Rokubacteria_73_35_curated
luciferase-like protein
13_1_20cm_2_scaffold_3650_3

Not on your lists

comp(1293..2681)
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI00037ABE6F rbh
Uncharacterized protein {ECO:0000313|EMBL:KGA21673.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
hypothetical protein
13_1_20cm_2_scaffold_3650_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3632..4132
DNA (501bp) protein (167aa)
hydroquinone dioxygenase small subunit n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B7661C
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hydroxyquinol 1,2-dioxygenase
13_1_20cm_2_scaffold_3650_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

4185..5168
DNA (984bp) protein (328aa)
Hydroquinone dioxygenase large subunit n=1 Tax=Sphingomonas sp. TTNP3 RepID=F8TW83_9SPHN
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hydroxyquinol 1,2-dioxygenase
13_1_20cm_2_scaffold_3650_6
Pseudomonas sp. GM74, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5179..6519
DNA (1341bp) protein (447aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Pseudomonas sp. GM74 RepID=J3BIM3_9PSED rbh
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJM86173.1}; Flags: Precursor;; TaxID=1144336 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseud
ABC-type branched-chain amino acid transport system, periplasmic component
13_1_20cm_2_scaffold_3650_7
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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6523..7275
DNA (753bp) protein (251aa)
ABC transporter ATP-binding protein n=1 Tax=Rhizobium loti RepID=UPI0003680E3E
putative branched-chain amino acid ABC transporter ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
putative branched-chain amino acid ABC transporter, ATP-binding protein
13_1_20cm_2_scaffold_3650_8
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7295..7993
DNA (699bp) protein (233aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Pseudomonas sp. GM78 RepID=J2WHG7_9PSED
livF; high-affinity branched-chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curate
ABC transporter family protein
13_1_20cm_2_scaffold_3650_9
Pseudomonas sp. GM78, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7997..8869
DNA (873bp) protein (291aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Pseudomonas sp. GM78 RepID=J3I8H9_9PSED
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:EJN18203.1}; Flags: Precursor;; TaxID=1144337 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomo
ABC transporter permease
13_1_20cm_2_scaffold_3650_10
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8866..9930
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002E1B87D rbh
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
hypothetical protein
13_1_20cm_2_scaffold_3650_11
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

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9936..10808
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI000377418A
coxD; putative ATPase chaperone CoxD Tax=RBG_16_Actinobacteria_68_21_curated
coxD; putative ATPase chaperone CoxD
13_1_20cm_2_scaffold_3650_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

10828..11265
DNA (438bp) protein (146aa)
DoxX family protein n=1 Tax=Leptospira kmetyi serovar Malaysia str. Bejo-Iso9 RepID=V6HJS5_9LEPT
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_20cm_2_scaffold_3650_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11269..11775)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X4E4_COMTE
protein of unknown function DUF35 Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_20cm_2_scaffold_3650_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11879..13027)
DNA (1149bp) protein (383aa)
propanoyl-CoA C-acyltransferase (EC:2.3.1.176) Tax=GWA2_Rokubacteria_73_35_curated
Putative lipid-transfer protein n=1 Tax=uncultured bacterium 888 RepID=B8R8R6_9BACT
thiolase
13_1_20cm_2_scaffold_3650_15
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(13024..13809)
DNA (786bp) protein (262aa)
Putative Alpha/beta hydrolase fold n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EU96_MODMB
alpha/beta hydrolase Tax=CSP1_6_Rokubacteria
alpha/beta hydrolase
13_1_20cm_2_scaffold_3650_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13874..15091)
DNA (1218bp) protein (406aa)
Major facilitator superfamily protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWF1_9RHIZ
major facilitator transporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
MFS transporter permease
13_1_20cm_2_scaffold_3650_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15094..17880)
DNA (2787bp) protein (929aa)
Excinuclease ABC, subunit A n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PI22_9BACT rbh
uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
uvrA; excinuclease ABC subunit A
13_1_20cm_2_scaffold_3650_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17996..18511
DNA (516bp) protein (172aa)
Ferric-uptake regulator n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W4C7_DESIS
Fur family ferric uptake regulator; K03711 Fur family transcriptional regulator, ferric uptake regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ferric-uptake regulator
13_1_20cm_2_scaffold_3650_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18466..18828
DNA (363bp) protein (121aa)
Rubrerythrin n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P878_9BACT
rbr; rubrerythrin Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
rbr; rubrerythrin
Displaying 19 items

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