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13_1_20cm_2_scaffold_8701

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_8701_1
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(407..1351)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Paenibacillus ginsengihumi RepID=UPI0003669DC0
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:AJY76664.1}; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus b
ECF subfamily RNA polymerase sigma-24 factor
13_1_20cm_2_scaffold_8701_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(1363..1662)
DNA (300bp) protein (100aa)
ribonuclease H; K03469 ribonuclease HI [EC:3.1.26.4] Tax=GWC2_Rokubacteria_70_16_curated
ribonuclease H n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002EF8831
ribonuclease H
13_1_20cm_2_scaffold_8701_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(1824..2537)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKY7_9BACT
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_20cm_2_scaffold_8701_trna_1
unknown

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comp(2818..2889)
DNA (72bp)
transferRNA
13_1_20cm_2_scaffold_8701_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2909..4759)
DNA (1851bp) protein (617aa)
RNA polymerase sigma factor RpoD n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UDJ5_MYXSD
rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor Tax=GWC2_Rokubacteria_70_16_curated
RNA polymerase sigma factor RpoD
13_1_20cm_2_scaffold_8701_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(4752..6626)
DNA (1875bp) protein (625aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
DNA primase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJD1_RHOMR
DNA primase
13_1_20cm_2_scaffold_8701_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(6629..9070)
DNA (2442bp) protein (814aa)
Endonuclease MutS2 n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CQI9_DESK7
MutS2 family protein; K07456 DNA mismatch repair protein MutS2 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
MutS2 protein
13_1_20cm_2_scaffold_8701_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9160..9354)
DNA (195bp) protein (65aa)
30S ribosomal protein S21 n=4 Tax=Leptospirillum RepID=J9ZDE5_LEPFM
rpsU; 30S ribosomal protein S21 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
rpsU; 30S ribosomal protein S21
13_1_20cm_2_scaffold_8701_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9485..10729
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ALA1_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_20cm_2_scaffold_8701_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(10749..11273)
DNA (525bp) protein (175aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] Tax=GWA2_Rokubacteria_73_35_curated
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QDG2_9FIRM
13_1_20cm_2_scaffold_8701_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists


comp(11289..11660)
DNA (372bp) protein (124aa)
50S ribosomal protein L25 n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=RL25_HALOH alias=16ft_combo_ws3_scaffold_1060_27 id=5223240 tax=16ft_combo_ws3 species=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 Tax=GWA2_Rokubacteria_73_35_curated
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
Displaying 11 items

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