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13_1_40cm_2_scaffold_13987

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_13987_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1..2508
DNA (2508bp) protein (836aa)
mutS; DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DNA mismatch repair protein MutS id=4430853 bin=GWC2_Methylomirabilis_70_24 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
DNA mismatch repair protein MutS
13_1_40cm_2_scaffold_13987_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2609..4321
DNA (1713bp) protein (571aa)
mutL; DNA mismatch repair protein; K03572 DNA mismatch repair protein MutL Tax=GWA2_Rokubacteria_73_35_curated
DNA mismatch repair protein MutL id=4555220 bin=GWF2_Methylomirabilis_70_14 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
mutL; DNA mismatch repair protein
13_1_40cm_2_scaffold_13987_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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4338..5273
DNA (936bp) protein (312aa)
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=GWA2_Rokubacteria_73_35_curated
tRNA dimethylallyltransferase id=4853966 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
miaA-1; tRNA delta(2)-isopentenylpyrophosphate transferase
13_1_40cm_2_scaffold_13987_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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5270..6556
DNA (1287bp) protein (429aa)
GTP-binding protein HflX; K03665 GTP-binding protein HflX Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
GTPase HflX id=4853967 bin=GWA2_Methylomirabilis_73_35 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GTP-binding protein HflX
13_1_40cm_2_scaffold_13987_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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6576..7148
DNA (573bp) protein (191aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase id=4853968 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_2_scaffold_13987_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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7123..8454
DNA (1332bp) protein (444aa)
Putative uncharacterized protein id=4853969 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
iron-sulfur cluster-binding oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
iron-sulfur cluster-binding oxidoreductase, cyano_FeS_chp family
13_1_40cm_2_scaffold_13987_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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8461..9819
DNA (1359bp) protein (453aa)
GTPase Der id=4853970 bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
small GTP-binding protein domain-containing protein; K03977 GTP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
small GTP-binding protein domain-containing protein
13_1_40cm_2_scaffold_13987_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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9816..10742
DNA (927bp) protein (309aa)
Uncharacterized protein id=4853971 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_2_scaffold_13987_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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10724..11674
DNA (951bp) protein (317aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Blr0521 protein id=4853972 bin=GWA2_Methylomirabilis_73_35 species=Tropheryma whipplei genus=Tropheryma taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_13987_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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11701..11985
DNA (285bp) protein (95aa)
integration host factor subunit alpha; K04764 integration host factor subunit alpha Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Integration host factor, alpha subunit id=4853973 bin=GWA2_Methylomirabilis_73_35 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
integration host factor subunit alpha
13_1_40cm_2_scaffold_13987_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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12045..12338
DNA (294bp) protein (98aa)
regulatory protein MerR Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Transcriptional regulator, MerR family id=4853974 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MerR family transcriptional regulator
13_1_40cm_2_scaffold_13987_12
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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12468..13580
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Aquimarina agarilytica RepID=UPI000289AF88
hypothetical protein Tax=RBG_16_Gallionellales_56_9_curated
13_1_40cm_2_scaffold_13987_trna_1
unknown

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13672..13745
DNA (74bp)
transferRNA
Displaying 13 items

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