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13_1_40cm_2_scaffold_30384

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_30384_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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2..592
DNA (591bp) protein (197aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14625615 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_30384_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

600..1592
DNA (993bp) protein (331aa)
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase id=3662441 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_30384_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1709..1942
DNA (234bp) protein (78aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_40cm_2_scaffold_30384_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1946..2641
DNA (696bp) protein (232aa)
hydrolase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative hydrolase id=4350137 bin=GWC2_Methylomirabilis_70_16 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_30384_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2638..2844
DNA (207bp) protein (69aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
hydrolase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase id=3662440 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Sulfolobus taxon_order=Sulfolobales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_30384_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2852..4093
DNA (1242bp) protein (414aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Elongation factor G id=3662439 bin=GWA2_Methylomirabilis_73_35 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
threonine synthase
13_1_40cm_2_scaffold_30384_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4249..6327
DNA (2079bp) protein (693aa)
translation elongation factor G; K02355 elongation factor G Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Elongation factor G id=3662439 bin=GWA2_Methylomirabilis_73_35 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
fusA; elongation factor G
13_1_40cm_2_scaffold_30384_8
unknown

Not on your lists

6603..6977
DNA (375bp) protein (125aa)

This feature has no annotations

13_1_40cm_2_scaffold_30384_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

7141..8256
DNA (1116bp) protein (372aa)
hypothetical protein; K07112 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=3662437 bin=GWA2_Methylomirabilis_73_35 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_30384_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8270..9532
DNA (1263bp) protein (421aa)
fccB; sulfide dehydrogenase flavoprotein subunit (EC:1.8.2.-) Tax=GWA2_Rokubacteria_73_35_curated
fccB; sulfide dehydrogenase flavoprotein subunit (EC:1.8.2.-)
Flavocytochrome C sulphide dehydrogenase flavin-binding protein id=3662436 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus pinatubonensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_40cm_2_scaffold_30384_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

9545..10129
DNA (585bp) protein (195aa)
cytochrome c class I Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Cytochrome c id=3662435 bin=GWA2_Methylomirabilis_73_35 species=Phenylobacterium zucineum genus=Phenylobacterium taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cytochrome c
13_1_40cm_2_scaffold_30384_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

10170..10862
DNA (693bp) protein (231aa)
GntR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
GntR family transcriptional regulator id=14625729 bin=bin7_NC10_sister species=Brucella ceti genus=Brucella taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
putative GntR, transcriptional regulator GntR
13_1_40cm_2_scaffold_30384_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

10843..11160
DNA (318bp) protein (106aa)
dissimilatory sulfite reductase (desulfoviridin), alpha/beta subunit; K00176 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] Tax=GWA2_Rokubacteria_70_23_curated
Dissimilatory sulfite reductase (Desulfoviridin), alpha/beta subunit id=4571149 bin=GWF2_Methylomirabilis_70_14 species=Marinitoga piezophila genus=Marinitoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dissimilatory sulfite reductase subunit alpha/beta
13_1_40cm_2_scaffold_30384_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11271..12404
DNA (1134bp) protein (378aa)
2-oxoacid:ferredoxin oxidoreductase, alpha subunit Tax=GWA2_Rokubacteria_70_23_curated
2-oxoglutarate ferredoxin oxidoreductase, alpha subunit id=4571147 bin=GWF2_Methylomirabilis_70_14 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2-oxoacid:ferredoxin oxidoreductase, alpha subunit
Displaying 14 items

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