ggKbase home page

13_1_40cm_2_scaffold_4649

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_4649_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1..342
DNA (342bp) protein (114aa)
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8); K15916 glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8)
Bifunctional phosphoglucose/phosphomannose isomerase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CN91_DESK7
13_1_40cm_2_scaffold_4649_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

382..1533
DNA (1152bp) protein (384aa)
metK; S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
metK; methionine adenosyltransferase (EC:2.5.1.6) id=14625753 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10 rbh
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
13_1_40cm_2_scaffold_4649_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

1625..2884
DNA (1260bp) protein (420aa)
adenosylhomocysteinase (EC:3.3.1.1) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase id=4810684 bin=GWC2_Methylomirabilis_70_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_2_scaffold_4649_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2896..5610
DNA (2715bp) protein (905aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
UPF0182 protein DAMO_1249 id=3462292 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_4649_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5617..7050)
DNA (1434bp) protein (478aa)
Putative permease id=3462289 bin=GWA2_Methylomirabilis_73_35 species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
YjgP/YjgQ family permease Tax=GWA2_Rokubacteria_73_35_curated
putative permease
13_1_40cm_2_scaffold_4649_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7979..8995
DNA (1017bp) protein (339aa)
Valine--tRNA ligase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Valine--tRNA ligase id=4208290 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_4649_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(9125..9454)
DNA (330bp) protein (110aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
13_1_40cm_2_scaffold_4649_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


10138..11604
DNA (1467bp) protein (489aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase id=3887642 bin=GWC2_Methylomirabilis_70_24 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Displaying 8 items

View Taxonomy