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13_1_40cm_2_scaffold_55288

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_55288_1
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..339
DNA (339bp) protein (113aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Acidovorax sp. CF316 RepID=J1E7T5_9BURK
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
ABC transporter-like protein
13_1_40cm_2_scaffold_55288_2
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

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343..1116
DNA (774bp) protein (258aa)
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
ABC transporter ATP-binding protein id=4806461 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative branched-chain amino acid ABC transporter, ATP-binding protein
13_1_40cm_2_scaffold_55288_3
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1107..2954
DNA (1848bp) protein (616aa)
AMP-forming long-chain acyl-CoA synthetase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I3T2_9BRAD
AMP-forming long-chain acyl-CoA synthetase {ECO:0000313|EMBL:EJN14118.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source
AMP-dependent synthetase and ligase
13_1_40cm_2_scaffold_55288_4
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2997..4172
DNA (1176bp) protein (392aa)
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:EYS83067.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;
Putative uncharacterized protein id=4153680 bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC-type branched-chain amino acid transport system, periplasmic component
13_1_40cm_2_scaffold_55288_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4172..5161
DNA (990bp) protein (330aa)
zinc-binding dehydrogenase family oxidoreductase; K00344 NADPH2:quinone reductase [EC:1.6.5.5] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1G9J9_9BURK rbh
zinc-binding dehydrogenase oxidoreductase
13_1_40cm_2_scaffold_55288_6
unknown

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comp(5178..5471)
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_40cm_2_scaffold_55288_7
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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5612..6160
DNA (549bp) protein (183aa)
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGV9_SINAD
Uncharacterized protein {ECO:0000313|EMBL:ETW98383.1}; Flags: Fragment;; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
F420-dependent methylene-tetrahydromethanopterin reductase
13_1_40cm_2_scaffold_55288_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(6220..6513)
DNA (294bp) protein (98aa)
RNP-1 like RNA-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
RNP-1 like RNA-binding protein id=4283016 bin=GWC2_Methylomirabilis_70_16 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RNP-1 like RNA-binding protein
13_1_40cm_2_scaffold_55288_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(6861..6995)
DNA (135bp) protein (45aa)
Extracellular solute-binding protein family 5 Tax=GWC2_Rokubacteria_70_16_curated
13_1_40cm_2_scaffold_55288_10

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comp(7271..8281)
DNA (1011bp) protein (337aa)
Glutathione ABC transport system substrate binding protein GsiB id=4621965 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Bacterial extracellular solute-binding proteins, family 5 Middle {ECO:0000313|EMBL:AIA17927.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
h16_A2949; ABC transporter periplasmic protein
13_1_40cm_2_scaffold_55288_11
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8296..9195)
DNA (900bp) protein (300aa)
binding-protein-dependent transport system inner membrane protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
glutathione transport system permease GsiD; K02034 peptide/nickel transport system permease protein id=14431363 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
binding-protein-dependent transport system inner membrane protein
13_1_40cm_2_scaffold_55288_12
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9203..9949)
DNA (747bp) protein (249aa)
dppB; peptide ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
ABC transporter permease id=3677747 bin=GWF2_Methylomirabilis_70_14 species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dipeptide/oligopeptide/nickel ABC transporter permease
Displaying 12 items

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