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13_1_40cm_2_scaffold_7329

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_7329_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2..943
DNA (942bp) protein (314aa)
Uncharacterized protein id=2216071 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Protein export membrane protein, SecD/SecF family Tax=GWA2_Rokubacteria_73_35_curated
hpnN; efflux pump, RND superfamily
13_1_40cm_2_scaffold_7329_2
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(956..1948)
DNA (993bp) protein (331aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein id=14625634 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_7329_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(1965..3539)
DNA (1575bp) protein (525aa)
copper resistance D domain-containing protein; K07245 putative copper resistance protein D id=14626780 bin=bin7_NC10_sister species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
copper resistance D domain-containing protein; K07245 putative copper resistance protein D Tax=CSP1_6_Rokubacteria
copper resistance protein CopC
13_1_40cm_2_scaffold_7329_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3523..4716)
DNA (1194bp) protein (398aa)
membrane protein Tax=GWA2_Rokubacteria_70_23_curated
Uncharacterized protein id=4870515 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
membrane protein
13_1_40cm_2_scaffold_7329_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4713..5747)
DNA (1035bp) protein (345aa)
Putative Oxidoreductase domain protein id=4870514 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Oxidoreductase domain protein Tax=GWA2_Rokubacteria_70_23_curated
Oxidoreductase domain protein
13_1_40cm_2_scaffold_7329_6
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(5751..7082)
DNA (1332bp) protein (444aa)
aminotransferase (EC:2.6.1.-) Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
aminotransferase (EC:2.6.1.-)
Aminotransferase id=4396514 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_7329_7
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(7079..7918)
DNA (840bp) protein (280aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Uncharacterized protein id=4870512 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_40cm_2_scaffold_7329_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7915..8634)
DNA (720bp) protein (240aa)
Putative Nucleotidyl transferase id=4396485 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Nucleotidyl transferase Tax=GWA2_Rokubacteria_70_23_curated
Nucleotidyl transferase
13_1_40cm_2_scaffold_7329_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8631..9308)
DNA (678bp) protein (226aa)
Putative HAD-superfamily hydrolase, subfamily IA, variant 3 id=4870510 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
HAD-superfamily hydrolase, subfamily IA, variant 3 Tax=GWA2_Rokubacteria_70_23_curated
HAD-superfamily hydrolase, subfamily IA, variant 3
13_1_40cm_2_scaffold_7329_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9343..10710)
DNA (1368bp) protein (456aa)
Putative molybdopterin oxidoreductase id=2216073 bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
molybdopterin oxidoreductase Tax=GWA2_Rokubacteria_73_35_curated
molybdopterin oxidoreductase
13_1_40cm_2_scaffold_7329_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10673..11071)
DNA (399bp) protein (133aa)
Putative molybdopterin oxidoreductase id=2216073 bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
molybdopterin oxidoreductase Tax=GWA2_Rokubacteria_73_35_curated
molybdopterin oxidoreductase
13_1_40cm_2_scaffold_7329_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11366..12622
DNA (1257bp) protein (419aa)
Major facilitator superfamily MFS_1 id=4870519 bin=GWC2_Methylomirabilis_70_24 species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
major facilitator superfamily protein Tax=GWA2_Rokubacteria_70_23_curated
major facilitator superfamily protein
13_1_40cm_2_scaffold_7329_13
Tolypothrix sp. PCC 7601, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(12730..13314)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9X7D5_9NOST
Uncharacterized protein {ECO:0000313|EMBL:EKE99303.1}; TaxID=1188 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
hypothetical protein
13_1_40cm_2_scaffold_7329_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(13360..13608)
DNA (249bp) protein (83aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=2216079 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_7329_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13774..14085)
DNA (312bp) protein (104aa)
Putative uncharacterized protein id=2216080 bin=GWA2_Methylomirabilis_73_35 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_2_scaffold_7329_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

14186..15814
DNA (1629bp) protein (543aa)
malate synthase A (EC:2.3.3.9); K01638 malate synthase [EC:2.3.3.9] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
malate synthase A (EC:2.3.3.9)
putative malate synthase id=14626776 bin=bin7_NC10_sister species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_2_scaffold_7329_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(15908..16669)
DNA (762bp) protein (254aa)
methylmalonyl-CoA epimerase (EC:4.4.1.5); K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] Tax=GWA2_Rokubacteria_73_35_curated
Lactoylglutathione lyase and related lyases id=2216086 bin=GWA2_Methylomirabilis_73_35 species=uncultured Chloroflexi bacterium HF0200_09I09 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
methylmalonyl-CoA mutase C-terminal domain/subunit (Cobalamin-binding)-like protein
13_1_40cm_2_scaffold_7329_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(16684..17142)
DNA (459bp) protein (153aa)
NUDIX hydrolase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
HAD-superfamily hydrolase, subfamily IIA id=2216087 bin=GWA2_Methylomirabilis_73_35 species=Dethiosulfovibrio peptidovorans genus=Dethiosulfovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_7329_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(17139..17504)
DNA (366bp) protein (122aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14626779 bin=bin7_NC10_sister species=Physcomitrella patens genus=Physcomitrella taxon_order=Funariales taxon_class=Bryopsida phylum=Streptophyta tax=bin7_NC10_sister organism_group=NC10
aldo/keto reductase
Displaying 19 items

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