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13_2_20cm_scaffold_1406

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1406_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..654
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQM5_SORC5
acetyltransferase
Uncharacterized protein {ECO:0000313|EMBL:CAN90467.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
13_2_20cm_scaffold_1406_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(788..2215)
DNA (1428bp) protein (476aa)
dihydropyrimidinase; K01464 dihydropyrimidinase [EC:3.5.2.2] Tax=GWA2_Rokubacteria_70_23_curated
dihydropyrimidinase (EC:3.5.2.2)
Dihydropyrimidinase id=3971522 bin=GWC2_Methylomirabilis_70_24 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
13_2_20cm_scaffold_1406_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(2229..3260)
DNA (1032bp) protein (344aa)
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein id=3971523 bin=GWC2_Methylomirabilis_70_24 species=Bacillus methanolicus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
13_2_20cm_scaffold_1406_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(3293..4042)
DNA (750bp) protein (250aa)
ABC transporter, membrane spanning protein (Nitrate/sulfonates) id=3971524 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
ssuC; ABC transporter, membrane spanning protein (nitrate/sulfonates); K15554 sulfonate transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter permease protein (nitrate/sulfonates)
13_2_20cm_scaffold_1406_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(4039..4824)
DNA (786bp) protein (262aa)
ABC transporter related Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ABC transporter-related protein id=3348592 bin=GWF2_Methylomirabilis_70_14 species=Methanocaldococcus villosus genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
ABC transporter releated protein
13_2_20cm_scaffold_1406_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(4824..5651)
DNA (828bp) protein (276aa)
ABC transporter permease; K02050 NitT/TauT family transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ABC-type transporter, integral membrane subunit id=3971526 bin=GWC2_Methylomirabilis_70_24 species=Rhodococcus triatomae genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
nitrate/sulfonate/bicarbonate ABC transporter permease
13_2_20cm_scaffold_1406_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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5677..6993
DNA (1317bp) protein (439aa)
amidohydrolase; K01485 cytosine deaminase [EC:3.5.4.1] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Amidohydrolase id=4792716 bin=GWC2_Methylomirabilis_70_16 species=Enterococcus faecalis genus=Enterococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative hydrolase
13_2_20cm_scaffold_1406_8
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

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7019..7903
DNA (885bp) protein (295aa)
Phosphogluconate dehydrogenase, NAD-binding id=3680154 bin=GWA2_Elusimicrobia_69_24 species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
phosphogluconate dehydrogenase, NAD-binding protein Tax=GWA2_Elusimicrobia_69_24_curated
hypothetical protein
13_2_20cm_scaffold_1406_9
unknown

Not on your lists

comp(7964..8263)
DNA (300bp) protein (100aa)

This feature has no annotations

13_2_20cm_scaffold_1406_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8354..9550)
DNA (1197bp) protein (399aa)
formyl-CoA transferase (EC:2.8.3.16); K07749 formyl-CoA transferase [EC:2.8.3.16] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Formyl-coenzyme A transferase n=1 Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=FCTA_STRAW
formyl-coenzyme A transferase
13_2_20cm_scaffold_1406_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9837..11471)
DNA (1635bp) protein (545aa)
thiamine pyrophosphate protein central region; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Thiamine pyrophosphate protein id=4148695 bin=GWC2_Syntrophobacterales_56_13 species=Bacillus bataviensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
thiamine pyrophosphate protein central region
13_2_20cm_scaffold_1406_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

11606..12913
DNA (1308bp) protein (436aa)
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative sugar uptake ABC transporter periplasmic solute-binding protein id=2228895 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sugar ABC transporter substrate-binding protein
13_2_20cm_scaffold_1406_13
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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12926..13972
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037C9B61
Uncharacterized protein {ECO:0000313|EMBL:ETW99261.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
luciferase-like monooxygenase
13_2_20cm_scaffold_1406_14
Thermus filiformis, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(14137..14424)
DNA (288bp) protein (96aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=276 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="
13_2_20cm_scaffold_1406_15
unknown

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14703..14945
DNA (243bp) protein (81aa)

This feature has no annotations

Displaying 15 items

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