ggKbase home page

13_2_20cm_scaffold_14675

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_14675_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


1..183
DNA (183bp) protein (61aa)
rplL; 50S ribosomal protein L7/L12 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
50S ribosomal protein L7/L12 id=3836420 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rplL; 50S ribosomal protein L7/L12
13_2_20cm_scaffold_14675_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

263..2659
DNA (2397bp) protein (799aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
rpoB; RNA polymerase subunit beta (EC:2.7.7.6) id=14627332 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
rpoB; DNA-directed RNA polymerase subunit beta
13_2_20cm_scaffold_14675_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

2634..4256
DNA (1623bp) protein (541aa)
rpoB; RNA polymerase subunit beta (EC:2.7.7.6) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
rpoB; RNA polymerase subunit beta (EC:2.7.7.6) id=14627332 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
rpoB; RNA polymerase subunit beta (EC:2.7.7.6)
13_2_20cm_scaffold_14675_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

4289..8392
DNA (4104bp) protein (1368aa)
rpoC; RNA polymerase, beta prime subunit (EC:2.7.7.6) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
rpoC; RNA polymerase, beta prime subunit (EC:2.7.7.6) id=14627331 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10 rbh
rpoC; RNA polymerase, beta prime subunit (EC:2.7.7.6)
13_2_20cm_scaffold_14675_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


8476..8859
DNA (384bp) protein (128aa)
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
30S ribosomal protein S12 id=3836486 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpsL; 30S ribosomal protein S12
13_2_20cm_scaffold_14675_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists


8863..9192
DNA (330bp) protein (110aa)
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 id=14627329 bin=bin7_NC10_sister species=Photobacterium profundum genus=Photobacterium taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
rpsG; 30S ribosomal protein S7
Displaying 6 items

View Taxonomy