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13_2_20cm_scaffold_3302

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_3302_1
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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2..361
DNA (360bp) protein (120aa)
branched chain amino acid ABC transporter substrate-binding protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
livK; branched-chain/neutral amino acids amide ABC transporter periplasmic substrate-binding protein id=14625571 bin=bin7_NC10_sister species=Haloferax denitrificans genus=Haloferax taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
13_2_20cm_scaffold_3302_2
R_NC10_66_22, NC10, Bacteria

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1013..2662
DNA (1650bp) protein (550aa)
solute binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Putative uncharacterized protein id=14625570 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacillariophyta tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_3302_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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2662..3537
DNA (876bp) protein (292aa)
livH-3; branched-chain amino acid ABC transporter permease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
livH-3; branched-chain amino acid ABC transporter permease id=14625569 bin=bin7_NC10_sister species=Natrinema versiforme genus=Natrinema taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
inner-membrane translocator
13_2_20cm_scaffold_3302_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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3534..4547
DNA (1014bp) protein (338aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein id=14625568 bin=bin7_NC10_sister species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=CSP1_6_Rokubacteria
inner-membrane translocator
13_2_20cm_scaffold_3302_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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4549..5304
DNA (756bp) protein (252aa)
Branched-chain amino acid ABC transporter ATP-binding protein id=5022300 bin=GWA2_Methylomirabilis_73_35 species=Haloferax denitrificans genus=Haloferax taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
livG3; branched-chain amino acid ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
branched-chain amino acid ABC transporter ATP-binding protein
13_2_20cm_scaffold_3302_6
R_NC10_66_22, NC10, Bacteria

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5307..6038
DNA (732bp) protein (244aa)
ABC transporter ATP-binding protein, putative branched-chain amino acid transport; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
ABC transporter ATP-binding protein id=14625566 bin=bin7_NC10_sister species=Bordetella parapertussis genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter ATP-binding protein
13_2_20cm_scaffold_3302_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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6129..6809
DNA (681bp) protein (227aa)
Putative uncharacterized protein id=4306933 bin=GWF2_Methylomirabilis_70_14 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_2_20cm_scaffold_3302_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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6967..8670
DNA (1704bp) protein (568aa)
carbamoyltransferase (EC:2.1.3.-)
carbamoyl transferase Tax=GWA2_Rokubacteria_73_35_curated
Carbamoyl transferase id=4759402 bin=GWC2_Methylomirabilis_70_16 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_3302_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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8667..10076
DNA (1410bp) protein (470aa)
putative amidase protein; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PUTATIVE AMIDASE PROTEIN id=4323718 bin=GWC2_Methylomirabilis_70_16 species=Mesorhizobium loti genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
putative amidase protein
13_2_20cm_scaffold_3302_10
unknown

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12761..12934
DNA (174bp) protein (58aa)

This feature has no annotations

Displaying 10 items

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