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13_2_20cm_scaffold_4473

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_4473_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3..125)
DNA (123bp) protein (41aa)
amidase Tax=GWA2_Rokubacteria_70_23_curated
Amidase id=4748893 bin=GWC2_Methylomirabilis_70_16 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_4473_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(122..610)
DNA (489bp) protein (163aa)
amidase Tax=GWA2_Rokubacteria_70_23_curated
Amidase id=4748893 bin=GWC2_Methylomirabilis_70_16 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidase
13_2_20cm_scaffold_4473_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

855..1529
DNA (675bp) protein (225aa)
DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
DNA repair protein RadC; K03630 DNA repair protein RadC id=14627930 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=bin7_NC10_sister organism_group=NC10
DNA repair protein RadC
13_2_20cm_scaffold_4473_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1535..1984
DNA (450bp) protein (150aa)
putative glyoxalase; K07104 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative glyoxalase; K07104 id=14627931 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
putative glyoxalase
13_2_20cm_scaffold_4473_5
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(1991..2233)
DNA (243bp) protein (81aa)
id=14627932 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
id=4430353 Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
13_2_20cm_scaffold_4473_6
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(2566..3552)
DNA (987bp) protein (329aa)
dihydroorotate dehydrogenase (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
dihydroorotate dehydrogenase (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] id=14627933 bin=bin7_NC10_sister species=Mycobacterium sp. 155 genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
pyrD; dihydroorotate dehydrogenase PyrD
13_2_20cm_scaffold_4473_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3594..4367
DNA (774bp) protein (258aa)
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein id=14627958 bin=bin7_NC10_sister species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin7_NC10_sister organism_group=NC10
13_2_20cm_scaffold_4473_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4541..5704
DNA (1164bp) protein (388aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-ACP synthase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3-oxoacyl-[acyl-carrier-protein] synthase 2 id=3713931 bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_4473_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5708..6499
DNA (792bp) protein (264aa)
beta-ketoacyl synthase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative 3-oxoacyl-ACP synthase I id=14627961 bin=bin7_NC10_sister species=Streptomyces rapamycinicus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
3-oxoacyl-ACP synthase
13_2_20cm_scaffold_4473_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6507..6782
DNA (276bp) protein (92aa)
hypothetical protein; K02078 acyl carrier protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein; K02078 acyl carrier protein id=14627962 bin=bin7_NC10_sister species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
13_2_20cm_scaffold_4473_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

6779..7954
DNA (1176bp) protein (392aa)
Beta-ketoacyl synthase; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=GWA2_Rokubacteria_70_23_curated
3-oxoacyl-ACP synthase (EC:2.3.1.179)
Beta-ketoacyl synthase id=3713926 bin=GWC2_Methylomirabilis_70_16 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
13_2_20cm_scaffold_4473_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7957..8979
DNA (1023bp) protein (341aa)
beta-ketoacyl-acyl-carrier-protein synthase II (EC:2.3.1.179); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Beta-ketoacyl synthase id=3870372 bin=GWF2_Methylomirabilis_70_14 species=Thermomonospora curvata genus=Thermomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
3-oxoacyl-(ACP) synthase-like protein
13_2_20cm_scaffold_4473_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9031..9972
DNA (942bp) protein (314aa)
glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyltransferase involved in cell wall biogenesis id=3870373 bin=GWF2_Methylomirabilis_70_14 species=Granulibacter bethesdensis genus=Granulibacter taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 2 glycosyl transferase
13_2_20cm_scaffold_4473_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9969..11243
DNA (1275bp) protein (425aa)
monooxygenase FAD-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Flavin-dependent dehydrogenase id=2980067 bin=GWC2_Methylomirabilis_70_16 species=Xanthomonas gardneri genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
hypothetical protein
13_2_20cm_scaffold_4473_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11524..12705
DNA (1182bp) protein (394aa)
ABC transporter permease; K02004 putative ABC transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
Putative ABC transporter permease protein id=3955116 bin=GWA2_Methylomirabilis_73_35 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
ABC transporter permease
13_2_20cm_scaffold_4473_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12715..13380
DNA (666bp) protein (222aa)
putative ABC transporter ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC-type antimicrobial peptide transport system, ATPase component id=3955117 bin=GWA2_Methylomirabilis_73_35 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
efflux ABC transporter ATP-binding protein
13_2_20cm_scaffold_4473_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13409..13819
DNA (411bp) protein (137aa)
id=3870377 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=3870377 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_4473_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

13819..14190
DNA (372bp) protein (124aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Membrane protein, putative id=3955119 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_4473_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14214..15923
DNA (1710bp) protein (570aa)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase id=3955120 bin=GWA2_Methylomirabilis_73_35 species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase Tax=GWA2_Rokubacteria_73_35_curated
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
13_2_20cm_scaffold_4473_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(15907..16614)
DNA (708bp) protein (236aa)
polysaccharide deacetylase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Polysaccharide deacetylase id=3955121 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
polysaccharide deacetylase
13_2_20cm_scaffold_4473_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(16611..17657)
DNA (1047bp) protein (349aa)
monogalactosyldiacylglycerol synthase; K03429 1,2-diacylglycerol 3-glucosyltransferase [EC:2.4.1.157] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Monogalactosyldiacylglycerol synthase id=4620320 bin=GWF2_Methylomirabilis_70_14 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
monogalactosyldiacylglycerol synthase
13_2_20cm_scaffold_4473_22
unknown

Not on your lists

18504..18782
DNA (279bp) protein (93aa)

This feature has no annotations

Displaying 22 items

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